Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFAP04085 OR7E47P-201ENST00000546390 1422 ntBASIC19.54■□□□□ 0.72
PDGFAP04085 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDGFAP04085 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFAP04085 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.54■□□□□ 0.72
PDGFAP04085 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.54■□□□□ 0.72
PDGFAP04085 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PDGFAP04085 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.54■□□□□ 0.72
PDGFAP04085 AC053503.5-201ENST00000601508 636 ntBASIC19.54■□□□□ 0.72
PDGFAP04085 AC083880.1-201ENST00000608266 535 ntBASIC19.54■□□□□ 0.72
PDGFAP04085 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFAP04085 AC092068.2-201ENST00000590491 1708 ntBASIC19.54■□□□□ 0.72
PDGFAP04085 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFAP04085 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFAP04085 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFAP04085 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PDGFAP04085 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDGFAP04085 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFAP04085 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PDGFAP04085 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.53■□□□□ 0.72
PDGFAP04085 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
PDGFAP04085 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFAP04085 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFAP04085 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDGFAP04085 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFAP04085 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PDGFAP04085 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFAP04085 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFAP04085 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.52■□□□□ 0.72
PDGFAP04085 PKD1P6-201ENST00000343738 4769 ntBASIC19.52■□□□□ 0.72
PDGFAP04085 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
PDGFAP04085 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFAP04085 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.52■□□□□ 0.72
PDGFAP04085 BX276092.2-201ENST00000417668 665 ntBASIC19.52■□□□□ 0.72
PDGFAP04085 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.52■□□□□ 0.72
PDGFAP04085 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFAP04085 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.52■□□□□ 0.72
PDGFAP04085 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.52■□□□□ 0.72
PDGFAP04085 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFAP04085 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PDGFAP04085 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFAP04085 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFAP04085 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.52■□□□□ 0.71
PDGFAP04085 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFAP04085 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 AL512625.2-201ENST00000417533 625 ntBASIC19.51■□□□□ 0.71
PDGFAP04085 DUSP5P2-201ENST00000426873 1033 ntBASIC19.51■□□□□ 0.71
PDGFAP04085 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.51■□□□□ 0.71
PDGFAP04085 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDGFAP04085 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFAP04085 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDGFAP04085 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PDGFAP04085 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.5■□□□□ 0.71
PDGFAP04085 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDGFAP04085 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
PDGFAP04085 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PDGFAP04085 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 AC233723.2-201ENST00000623798 2106 ntBASIC19.5■□□□□ 0.71
PDGFAP04085 AC008694.1-202ENST00000636953 945 ntBASIC19.5■□□□□ 0.71
PDGFAP04085 MYC-209ENST00000641252 345 ntBASIC19.5■□□□□ 0.71
PDGFAP04085 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFAP04085 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFAP04085 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms