Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
APOA1P02647 BX323043.1-201ENST00000641006 1765 ntBASIC18.65■□□□□ 0.58
APOA1P02647 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
APOA1P02647 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOA1P02647 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
APOA1P02647 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
APOA1P02647 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.64■□□□□ 0.58
APOA1P02647 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.64■□□□□ 0.58
APOA1P02647 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
APOA1P02647 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
APOA1P02647 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.64■□□□□ 0.58
APOA1P02647 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
APOA1P02647 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.64■□□□□ 0.57
APOA1P02647 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.64■□□□□ 0.57
APOA1P02647 MIR4281-201ENST00000580852 62 ntBASIC18.64■□□□□ 0.57
APOA1P02647 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
APOA1P02647 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APOA1P02647 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOA1P02647 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
APOA1P02647 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
APOA1P02647 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA1P02647 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
APOA1P02647 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.63■□□□□ 0.57
APOA1P02647 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.63■□□□□ 0.57
APOA1P02647 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
APOA1P02647 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA1P02647 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.63■□□□□ 0.57
APOA1P02647 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
APOA1P02647 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOA1P02647 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.62■□□□□ 0.57
APOA1P02647 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
APOA1P02647 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 DUX4L4-201ENST00000566884 1269 ntBASIC18.62■□□□□ 0.57
APOA1P02647 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APOA1P02647 SMG8-203ENST00000578922 2178 ntBASIC18.62■□□□□ 0.57
APOA1P02647 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APOA1P02647 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
APOA1P02647 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOA1P02647 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.61■□□□□ 0.57
APOA1P02647 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.61■□□□□ 0.57
APOA1P02647 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.61■□□□□ 0.57
APOA1P02647 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APOA1P02647 THA1P-201ENST00000590384 1145 ntBASIC18.61■□□□□ 0.57
APOA1P02647 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOA1P02647 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
APOA1P02647 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
APOA1P02647 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
APOA1P02647 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
APOA1P02647 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
APOA1P02647 RNF126P1-201ENST00000567452 1320 ntBASIC18.6■□□□□ 0.57
APOA1P02647 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.6■□□□□ 0.57
APOA1P02647 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA1P02647 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.6■□□□□ 0.57
APOA1P02647 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
APOA1P02647 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOA1P02647 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA1P02647 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA1P02647 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.6■□□□□ 0.57
APOA1P02647 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms