Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.79■□□□□ 0.12
LTAP01374 AC012354.3-201ENST00000623734 483 ntBASIC15.79■□□□□ 0.12
LTAP01374 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LTAP01374 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.79■□□□□ 0.12
LTAP01374 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LTAP01374 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LTAP01374 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.78■□□□□ 0.12
LTAP01374 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LTAP01374 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 PCDHAC2-203ENST00000615316 3011 ntBASIC15.78■□□□□ 0.12
LTAP01374 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LTAP01374 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.78■□□□□ 0.12
LTAP01374 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.78■□□□□ 0.12
LTAP01374 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.78■□□□□ 0.12
LTAP01374 AL033527.3-201ENST00000566366 1196 ntBASIC15.78■□□□□ 0.12
LTAP01374 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LTAP01374 AC007225.1-201ENST00000566331 1836 ntBASIC15.78■□□□□ 0.12
LTAP01374 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.77■□□□□ 0.12
LTAP01374 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.77■□□□□ 0.12
LTAP01374 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 AC121338.2-201ENST00000622535 1744 ntBASIC15.77■□□□□ 0.12
LTAP01374 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LTAP01374 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LTAP01374 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.77■□□□□ 0.12
LTAP01374 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LTAP01374 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.77■□□□□ 0.12
LTAP01374 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.77■□□□□ 0.11
LTAP01374 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LTAP01374 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
LTAP01374 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.77■□□□□ 0.11
LTAP01374 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LTAP01374 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LTAP01374 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.76■□□□□ 0.11
LTAP01374 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
LTAP01374 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.76■□□□□ 0.11
LTAP01374 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LTAP01374 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LTAP01374 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LTAP01374 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LTAP01374 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.76■□□□□ 0.11
LTAP01374 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LTAP01374 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.75■□□□□ 0.11
LTAP01374 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 AP006587.3-201ENST00000525742 1516 ntBASIC15.75■□□□□ 0.11
LTAP01374 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LTAP01374 MIR4787-201ENST00000607364 84 ntBASIC15.75■□□□□ 0.11
LTAP01374 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.75■□□□□ 0.11
LTAP01374 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.75■□□□□ 0.11
LTAP01374 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LTAP01374 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LTAP01374 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.74■□□□□ 0.11
LTAP01374 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.74■□□□□ 0.11
LTAP01374 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LTAP01374 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LTAP01374 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms