Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DKK1O94907 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DKK1O94907 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DKK1O94907 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
DKK1O94907 AC061975.6-201ENST00000579045 1553 ntBASIC20.17■□□□□ 0.82
DKK1O94907 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
DKK1O94907 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.17■□□□□ 0.82
DKK1O94907 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.17■□□□□ 0.82
DKK1O94907 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.17■□□□□ 0.82
DKK1O94907 PNMA6B-201ENST00000538162 1200 ntBASIC20.17■□□□□ 0.82
DKK1O94907 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.17■□□□□ 0.82
DKK1O94907 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DKK1O94907 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DKK1O94907 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DKK1O94907 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.16■□□□□ 0.82
DKK1O94907 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 KRT17P3-201ENST00000420566 1262 ntBASIC20.16■□□□□ 0.82
DKK1O94907 AC091799.1-201ENST00000422823 811 ntBASIC20.16■□□□□ 0.82
DKK1O94907 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.16■□□□□ 0.82
DKK1O94907 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.16■□□□□ 0.82
DKK1O94907 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DKK1O94907 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DKK1O94907 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DKK1O94907 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DKK1O94907 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DKK1O94907 SNORA78-201ENST00000459373 127 ntBASIC20.15■□□□□ 0.82
DKK1O94907 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.15■□□□□ 0.82
DKK1O94907 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.15■□□□□ 0.82
DKK1O94907 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.15■□□□□ 0.82
DKK1O94907 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.15■□□□□ 0.82
DKK1O94907 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DKK1O94907 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DKK1O94907 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.15■□□□□ 0.82
DKK1O94907 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DKK1O94907 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
DKK1O94907 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
DKK1O94907 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DKK1O94907 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.14■□□□□ 0.81
DKK1O94907 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 LINC01023-201ENST00000606054 436 ntBASIC20.14■□□□□ 0.81
DKK1O94907 AC010331.1-201ENST00000611423 582 ntBASIC20.14■□□□□ 0.81
DKK1O94907 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DKK1O94907 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.13■□□□□ 0.81
DKK1O94907 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.13■□□□□ 0.81
DKK1O94907 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 AL589743.5-201ENST00000616611 1050 ntBASIC20.13■□□□□ 0.81
DKK1O94907 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DKK1O94907 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DKK1O94907 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.12■□□□□ 0.81
DKK1O94907 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.12■□□□□ 0.81
DKK1O94907 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DKK1O94907 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.12■□□□□ 0.81
DKK1O94907 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DKK1O94907 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
DKK1O94907 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
DKK1O94907 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.12■□□□□ 0.81
DKK1O94907 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.12■□□□□ 0.81
DKK1O94907 AC233263.1-201ENST00000578059 224 ntBASIC20.12■□□□□ 0.81
DKK1O94907 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.12■□□□□ 0.81
DKK1O94907 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DKK1O94907 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
DKK1O94907 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.12■□□□□ 0.81
DKK1O94907 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DKK1O94907 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.12■□□□□ 0.81
DKK1O94907 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.11■□□□□ 0.81
DKK1O94907 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.11■□□□□ 0.81
DKK1O94907 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms