Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
LTN1O94822 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC28.09■■■□□ 2.09
LTN1O94822 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LTN1O94822 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.09■■■□□ 2.09
LTN1O94822 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
LTN1O94822 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LTN1O94822 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC28.09■■■□□ 2.09
LTN1O94822 USP36-216ENST00000589424 970 ntTSL 5 BASIC28.09■■■□□ 2.09
LTN1O94822 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
LTN1O94822 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
LTN1O94822 UNC93B4-201ENST00000505679 747 ntBASIC28.08■■■□□ 2.09
LTN1O94822 AC092053.2-201ENST00000640557 1818 ntBASIC28.08■■■□□ 2.09
LTN1O94822 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.07■■■□□ 2.08
LTN1O94822 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
LTN1O94822 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.07■■■□□ 2.08
LTN1O94822 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC28.07■■■□□ 2.08
LTN1O94822 AC128676.1-201ENST00000454392 318 ntBASIC28.07■■■□□ 2.08
LTN1O94822 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.07■■■□□ 2.08
LTN1O94822 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.07■■■□□ 2.08
LTN1O94822 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC28.07■■■□□ 2.08
LTN1O94822 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
LTN1O94822 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC28.07■■■□□ 2.08
LTN1O94822 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC28.07■■■□□ 2.08
LTN1O94822 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LTN1O94822 LSM12P1-201ENST00000411836 588 ntBASIC28.06■■■□□ 2.08
LTN1O94822 PNMA6B-201ENST00000538162 1200 ntBASIC28.06■■■□□ 2.08
LTN1O94822 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC28.06■■■□□ 2.08
LTN1O94822 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
LTN1O94822 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LTN1O94822 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.06■■■□□ 2.08
LTN1O94822 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
LTN1O94822 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC28.06■■■□□ 2.08
LTN1O94822 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC28.06■■■□□ 2.08
LTN1O94822 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LTN1O94822 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC28.06■■■□□ 2.08
LTN1O94822 RHOD-202ENST00000532559 538 ntTSL 3 BASIC28.06■■■□□ 2.08
LTN1O94822 AC100791.3-201ENST00000617619 330 ntBASIC28.06■■■□□ 2.08
LTN1O94822 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LTN1O94822 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
LTN1O94822 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.05■■■□□ 2.08
LTN1O94822 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
LTN1O94822 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.05■■■□□ 2.08
LTN1O94822 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.05■■■□□ 2.08
LTN1O94822 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
LTN1O94822 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
LTN1O94822 KLF2-202ENST00000592003 564 ntTSL 3 BASIC28.05■■■□□ 2.08
LTN1O94822 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
LTN1O94822 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC28.04■■■□□ 2.08
LTN1O94822 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
LTN1O94822 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
LTN1O94822 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTN1O94822 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.04■■■□□ 2.08
LTN1O94822 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.04■■■□□ 2.08
LTN1O94822 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC28.03■■■□□ 2.08
LTN1O94822 PTPA-214ENST00000423100 988 ntTSL 2 BASIC28.03■■■□□ 2.08
LTN1O94822 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC28.03■■■□□ 2.08
LTN1O94822 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
LTN1O94822 AC073648.6-201ENST00000641589 218 ntBASIC28.03■■■□□ 2.08
LTN1O94822 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LTN1O94822 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.02■■■□□ 2.08
LTN1O94822 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.02■■■□□ 2.08
LTN1O94822 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LTN1O94822 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC28.02■■■□□ 2.08
LTN1O94822 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC28.02■■■□□ 2.08
LTN1O94822 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC28.02■■■□□ 2.08
LTN1O94822 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC28.02■■■□□ 2.08
LTN1O94822 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LTN1O94822 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LTN1O94822 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
LTN1O94822 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
LTN1O94822 MCRIP2P1-201ENST00000394346 511 ntBASIC28.01■■■□□ 2.08
LTN1O94822 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
LTN1O94822 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
LTN1O94822 CDV3P1-201ENST00000471403 739 ntBASIC28.01■■■□□ 2.08
LTN1O94822 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
LTN1O94822 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.01■■■□□ 2.07
LTN1O94822 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC28.01■■■□□ 2.07
LTN1O94822 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
LTN1O94822 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
LTN1O94822 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC28.01■■■□□ 2.07
LTN1O94822 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms