Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM13O60858 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM13O60858 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM13O60858 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM13O60858 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM13O60858 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM13O60858 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM13O60858 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM13O60858 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM13O60858 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM13O60858 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM13O60858 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM13O60858 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM13O60858 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM13O60858 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM13O60858 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM13O60858 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM13O60858 AC073314.1-201ENST00000568729 2216 ntBASIC20.61■□□□□ 0.89
TRIM13O60858 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM13O60858 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM13O60858 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM13O60858 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRIM13O60858 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM13O60858 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM13O60858 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM13O60858 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM13O60858 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM13O60858 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRIM13O60858 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM13O60858 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM13O60858 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM13O60858 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM13O60858 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
TRIM13O60858 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM13O60858 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM13O60858 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM13O60858 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRIM13O60858 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM13O60858 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
TRIM13O60858 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM13O60858 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRIM13O60858 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM13O60858 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM13O60858 AL356441.2-201ENST00000443009 864 ntBASIC20.58■□□□□ 0.89
TRIM13O60858 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRIM13O60858 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM13O60858 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM13O60858 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
TRIM13O60858 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
TRIM13O60858 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRIM13O60858 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM13O60858 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM13O60858 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM13O60858 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM13O60858 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM13O60858 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM13O60858 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM13O60858 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM13O60858 AC121338.2-201ENST00000622535 1744 ntBASIC20.57■□□□□ 0.88
TRIM13O60858 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM13O60858 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM13O60858 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM13O60858 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM13O60858 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM13O60858 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM13O60858 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM13O60858 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRIM13O60858 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRIM13O60858 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM13O60858 AC133561.4-201ENST00000566112 224 ntBASIC20.56■□□□□ 0.88
TRIM13O60858 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM13O60858 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms