Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 AC022616.5-201ENST00000518796 181 ntBASIC18.04■□□□□ 0.48
LYRM1O43325 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.04■□□□□ 0.48
LYRM1O43325 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LYRM1O43325 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.04■□□□□ 0.48
LYRM1O43325 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.04■□□□□ 0.48
LYRM1O43325 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYRM1O43325 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.04■□□□□ 0.48
LYRM1O43325 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.04■□□□□ 0.48
LYRM1O43325 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYRM1O43325 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.03■□□□□ 0.48
LYRM1O43325 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.03■□□□□ 0.48
LYRM1O43325 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LYRM1O43325 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.03■□□□□ 0.48
LYRM1O43325 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.03■□□□□ 0.48
LYRM1O43325 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYRM1O43325 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.02■□□□□ 0.48
LYRM1O43325 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
LYRM1O43325 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LYRM1O43325 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LYRM1O43325 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LYRM1O43325 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LYRM1O43325 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.02■□□□□ 0.48
LYRM1O43325 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYRM1O43325 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
LYRM1O43325 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.02■□□□□ 0.47
LYRM1O43325 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LYRM1O43325 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LYRM1O43325 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.02■□□□□ 0.47
LYRM1O43325 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
LYRM1O43325 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LYRM1O43325 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LYRM1O43325 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
LYRM1O43325 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.01■□□□□ 0.47
LYRM1O43325 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LYRM1O43325 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.01■□□□□ 0.47
LYRM1O43325 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
LYRM1O43325 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.01■□□□□ 0.47
LYRM1O43325 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.01■□□□□ 0.47
LYRM1O43325 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 AL162377.1-201ENST00000618844 1793 ntBASIC18.01■□□□□ 0.47
LYRM1O43325 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.01■□□□□ 0.47
LYRM1O43325 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYRM1O43325 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18■□□□□ 0.47
LYRM1O43325 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
LYRM1O43325 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
LYRM1O43325 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18■□□□□ 0.47
LYRM1O43325 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LYRM1O43325 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM1O43325 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18■□□□□ 0.47
LYRM1O43325 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.99■□□□□ 0.47
LYRM1O43325 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM1O43325 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM1O43325 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.99■□□□□ 0.47
LYRM1O43325 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms