Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.82■□□□□ 0.76
CLOCKO15516 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLOCKO15516 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 AC005837.3-201ENST00000612163 286 ntBASIC19.82■□□□□ 0.76
CLOCKO15516 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLOCKO15516 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.82■□□□□ 0.76
CLOCKO15516 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLOCKO15516 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLOCKO15516 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
CLOCKO15516 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.81■□□□□ 0.76
CLOCKO15516 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.81■□□□□ 0.76
CLOCKO15516 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.81■□□□□ 0.76
CLOCKO15516 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLOCKO15516 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
CLOCKO15516 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLOCKO15516 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.81■□□□□ 0.76
CLOCKO15516 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLOCKO15516 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLOCKO15516 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLOCKO15516 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.8■□□□□ 0.76
CLOCKO15516 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.8■□□□□ 0.76
CLOCKO15516 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 UNC93B3-201ENST00000308076 687 ntBASIC19.8■□□□□ 0.76
CLOCKO15516 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.8■□□□□ 0.76
CLOCKO15516 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLOCKO15516 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLOCKO15516 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLOCKO15516 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLOCKO15516 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.79■□□□□ 0.76
CLOCKO15516 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.79■□□□□ 0.76
CLOCKO15516 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLOCKO15516 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.79■□□□□ 0.76
CLOCKO15516 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLOCKO15516 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLOCKO15516 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 GABARAPL3-202ENST00000624044 1851 ntBASIC19.78■□□□□ 0.76
CLOCKO15516 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.78■□□□□ 0.76
CLOCKO15516 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLOCKO15516 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 AL136162.1-201ENST00000607711 1078 ntBASIC19.78■□□□□ 0.76
CLOCKO15516 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.78■□□□□ 0.76
CLOCKO15516 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.78■□□□□ 0.76
CLOCKO15516 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.78■□□□□ 0.76
CLOCKO15516 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.78■□□□□ 0.76
CLOCKO15516 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CLOCKO15516 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLOCKO15516 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.77■□□□□ 0.76
CLOCKO15516 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.77■□□□□ 0.76
CLOCKO15516 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLOCKO15516 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms