Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
TNRC18O15417 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNRC18O15417 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNRC18O15417 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TNRC18O15417 LINC01568-207ENST00000641790 1380 ntBASIC23.26■■□□□ 1.31
TNRC18O15417 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.26■■□□□ 1.31
TNRC18O15417 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.26■■□□□ 1.31
TNRC18O15417 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNRC18O15417 AC079598.2-202ENST00000546624 1451 ntBASIC23.26■■□□□ 1.31
TNRC18O15417 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.26■■□□□ 1.31
TNRC18O15417 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TNRC18O15417 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
TNRC18O15417 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.26■■□□□ 1.31
TNRC18O15417 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNRC18O15417 RBM17P1-201ENST00000453646 1190 ntBASIC23.26■■□□□ 1.31
TNRC18O15417 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.26■■□□□ 1.31
TNRC18O15417 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNRC18O15417 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNRC18O15417 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNRC18O15417 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNRC18O15417 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TNRC18O15417 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNRC18O15417 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.25■■□□□ 1.31
TNRC18O15417 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNRC18O15417 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.25■■□□□ 1.31
TNRC18O15417 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.25■■□□□ 1.31
TNRC18O15417 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
TNRC18O15417 AC006538.3-201ENST00000612495 578 ntBASIC23.25■■□□□ 1.31
TNRC18O15417 REXO1L10P-201ENST00000615707 1290 ntBASIC23.25■■□□□ 1.31
TNRC18O15417 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.25■■□□□ 1.31
TNRC18O15417 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNRC18O15417 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TNRC18O15417 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC23.25■■□□□ 1.31
TNRC18O15417 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
TNRC18O15417 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.24■■□□□ 1.31
TNRC18O15417 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.24■■□□□ 1.31
TNRC18O15417 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.24■■□□□ 1.31
TNRC18O15417 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.24■■□□□ 1.31
TNRC18O15417 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.24■■□□□ 1.31
TNRC18O15417 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TNRC18O15417 AC010947.1-201ENST00000623454 693 ntBASIC23.24■■□□□ 1.31
TNRC18O15417 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNRC18O15417 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.24■■□□□ 1.31
TNRC18O15417 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.23■■□□□ 1.31
TNRC18O15417 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.23■■□□□ 1.31
TNRC18O15417 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.23■■□□□ 1.31
TNRC18O15417 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TNRC18O15417 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TNRC18O15417 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 DUSP8P3-201ENST00000399571 1760 ntBASIC23.23■■□□□ 1.31
TNRC18O15417 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TNRC18O15417 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNRC18O15417 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.23■■□□□ 1.31
TNRC18O15417 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.23■■□□□ 1.31
TNRC18O15417 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.22■■□□□ 1.31
TNRC18O15417 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.22■■□□□ 1.31
TNRC18O15417 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
TNRC18O15417 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.22■■□□□ 1.31
TNRC18O15417 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 AP000593.1-201ENST00000393668 712 ntBASIC23.22■■□□□ 1.31
TNRC18O15417 NUDT16P1-203ENST00000513809 620 ntBASIC23.22■■□□□ 1.31
TNRC18O15417 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.22■■□□□ 1.31
TNRC18O15417 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.22■■□□□ 1.31
TNRC18O15417 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
TNRC18O15417 AC100791.3-201ENST00000617619 330 ntBASIC23.22■■□□□ 1.31
TNRC18O15417 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.22■■□□□ 1.31
TNRC18O15417 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNRC18O15417 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.22■■□□□ 1.31
TNRC18O15417 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.21■■□□□ 1.31
TNRC18O15417 AL137013.1-201ENST00000432946 1228 ntBASIC23.21■■□□□ 1.31
TNRC18O15417 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TNRC18O15417 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms