Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MID1O15344 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.05■□□□□ 0.96
MID1O15344 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MID1O15344 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MID1O15344 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MID1O15344 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MID1O15344 AC068473.5-201ENST00000616428 2072 ntBASIC21.05■□□□□ 0.96
MID1O15344 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.04■□□□□ 0.96
MID1O15344 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
MID1O15344 TSPY20P-201ENST00000450910 630 ntBASIC21.04■□□□□ 0.96
MID1O15344 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.04■□□□□ 0.96
MID1O15344 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.04■□□□□ 0.96
MID1O15344 AL162412.1-201ENST00000567129 965 ntBASIC21.04■□□□□ 0.96
MID1O15344 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.04■□□□□ 0.96
MID1O15344 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.04■□□□□ 0.96
MID1O15344 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MID1O15344 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.04■□□□□ 0.96
MID1O15344 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.03■□□□□ 0.96
MID1O15344 BX276092.2-201ENST00000417668 665 ntBASIC21.03■□□□□ 0.96
MID1O15344 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.03■□□□□ 0.96
MID1O15344 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 RARRES2P4-201ENST00000514074 484 ntBASIC21.03■□□□□ 0.96
MID1O15344 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.03■□□□□ 0.96
MID1O15344 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MID1O15344 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 AC242852.2-201ENST00000615738 1807 ntBASIC21.03■□□□□ 0.96
MID1O15344 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MID1O15344 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
MID1O15344 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.02■□□□□ 0.96
MID1O15344 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MID1O15344 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.02■□□□□ 0.96
MID1O15344 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.02■□□□□ 0.96
MID1O15344 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.02■□□□□ 0.96
MID1O15344 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
MID1O15344 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MID1O15344 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MID1O15344 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.02■□□□□ 0.96
MID1O15344 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MID1O15344 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.01■□□□□ 0.95
MID1O15344 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 MIR4651-201ENST00000582622 73 ntBASIC21.01■□□□□ 0.95
MID1O15344 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MID1O15344 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MID1O15344 AC233723.2-201ENST00000623798 2106 ntBASIC21.01■□□□□ 0.95
MID1O15344 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 GUSBP5-202ENST00000510805 1989 ntBASIC21■□□□□ 0.95
MID1O15344 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21■□□□□ 0.95
MID1O15344 AC245052.3-201ENST00000450182 901 ntBASIC21■□□□□ 0.95
MID1O15344 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21■□□□□ 0.95
MID1O15344 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21■□□□□ 0.95
MID1O15344 AC092118.2-201ENST00000613495 667 ntBASIC21■□□□□ 0.95
MID1O15344 AC010980.2-201ENST00000587099 1412 ntBASIC21■□□□□ 0.95
MID1O15344 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21■□□□□ 0.95
MID1O15344 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21■□□□□ 0.95
MID1O15344 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21■□□□□ 0.95
MID1O15344 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MID1O15344 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MID1O15344 AC091799.1-201ENST00000422823 811 ntBASIC20.99■□□□□ 0.95
MID1O15344 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.99■□□□□ 0.95
MID1O15344 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms