Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.37■□□□□ 0.85
UBFD1O14562 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.37■□□□□ 0.85
UBFD1O14562 AC105233.4-201ENST00000642045 216 ntBASIC20.37■□□□□ 0.85
UBFD1O14562 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
UBFD1O14562 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UBFD1O14562 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBFD1O14562 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBFD1O14562 AC073314.1-201ENST00000568729 2216 ntBASIC20.37■□□□□ 0.85
UBFD1O14562 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
UBFD1O14562 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 AC096631.2-201ENST00000436136 790 ntBASIC20.36■□□□□ 0.85
UBFD1O14562 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.36■□□□□ 0.85
UBFD1O14562 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
UBFD1O14562 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBFD1O14562 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.36■□□□□ 0.85
UBFD1O14562 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
UBFD1O14562 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBFD1O14562 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBFD1O14562 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBFD1O14562 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBFD1O14562 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBFD1O14562 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.35■□□□□ 0.85
UBFD1O14562 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
UBFD1O14562 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.35■□□□□ 0.85
UBFD1O14562 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.35■□□□□ 0.85
UBFD1O14562 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.35■□□□□ 0.85
UBFD1O14562 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBFD1O14562 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
UBFD1O14562 AP005212.1-201ENST00000581547 1997 ntBASIC20.35■□□□□ 0.85
UBFD1O14562 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBFD1O14562 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.35■□□□□ 0.85
UBFD1O14562 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBFD1O14562 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
UBFD1O14562 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBFD1O14562 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
UBFD1O14562 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UBFD1O14562 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.34■□□□□ 0.85
UBFD1O14562 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
UBFD1O14562 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UBFD1O14562 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.34■□□□□ 0.85
UBFD1O14562 PBX2P1-201ENST00000493219 1291 ntBASIC20.34■□□□□ 0.85
UBFD1O14562 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.34■□□□□ 0.85
UBFD1O14562 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.34■□□□□ 0.85
UBFD1O14562 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
UBFD1O14562 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.34■□□□□ 0.85
UBFD1O14562 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBFD1O14562 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
UBFD1O14562 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBFD1O14562 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBFD1O14562 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.33■□□□□ 0.85
UBFD1O14562 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.33■□□□□ 0.85
UBFD1O14562 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBFD1O14562 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBFD1O14562 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBFD1O14562 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBFD1O14562 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.33■□□□□ 0.85
UBFD1O14562 AP001330.3-201ENST00000520123 633 ntBASIC20.33■□□□□ 0.85
UBFD1O14562 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UBFD1O14562 AC027682.1-201ENST00000562846 899 ntBASIC20.33■□□□□ 0.85
UBFD1O14562 AC106739.1-201ENST00000617035 715 ntBASIC20.33■□□□□ 0.85
UBFD1O14562 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UBFD1O14562 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBFD1O14562 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBFD1O14562 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.33■□□□□ 0.84
UBFD1O14562 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBFD1O14562 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBFD1O14562 BX005040.4-201ENST00000637145 1518 ntBASIC20.32■□□□□ 0.84
UBFD1O14562 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBFD1O14562 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.32■□□□□ 0.84
UBFD1O14562 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBFD1O14562 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
UBFD1O14562 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.32■□□□□ 0.84
UBFD1O14562 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.32■□□□□ 0.84
UBFD1O14562 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
UBFD1O14562 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.32■□□□□ 0.84
UBFD1O14562 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
UBFD1O14562 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBFD1O14562 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBFD1O14562 AC121338.2-201ENST00000622535 1744 ntBASIC20.32■□□□□ 0.84
UBFD1O14562 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBFD1O14562 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms