Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 MIR6821-201ENST00000617625 74 ntBASIC20■□□□□ 0.79
RTCAO00442 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20■□□□□ 0.79
RTCAO00442 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20■□□□□ 0.79
RTCAO00442 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTCAO00442 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTCAO00442 AP004607.4-201ENST00000530158 1459 ntBASIC19.99■□□□□ 0.79
RTCAO00442 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTCAO00442 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTCAO00442 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RTCAO00442 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTCAO00442 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.99■□□□□ 0.79
RTCAO00442 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.99■□□□□ 0.79
RTCAO00442 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTCAO00442 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.99■□□□□ 0.79
RTCAO00442 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTCAO00442 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.99■□□□□ 0.79
RTCAO00442 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RTCAO00442 AC026271.2-201ENST00000428091 497 ntBASIC19.98■□□□□ 0.79
RTCAO00442 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.98■□□□□ 0.79
RTCAO00442 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTCAO00442 RARRES2P6-201ENST00000567333 442 ntBASIC19.98■□□□□ 0.79
RTCAO00442 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.98■□□□□ 0.79
RTCAO00442 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.98■□□□□ 0.79
RTCAO00442 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTCAO00442 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.97■□□□□ 0.79
RTCAO00442 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.97■□□□□ 0.79
RTCAO00442 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.97■□□□□ 0.79
RTCAO00442 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.97■□□□□ 0.79
RTCAO00442 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.97■□□□□ 0.79
RTCAO00442 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.97■□□□□ 0.79
RTCAO00442 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.97■□□□□ 0.79
RTCAO00442 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RTCAO00442 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RTCAO00442 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTCAO00442 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.96■□□□□ 0.79
RTCAO00442 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.96■□□□□ 0.79
RTCAO00442 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.96■□□□□ 0.79
RTCAO00442 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTCAO00442 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.96■□□□□ 0.79
RTCAO00442 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTCAO00442 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTCAO00442 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTCAO00442 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.95■□□□□ 0.78
RTCAO00442 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.95■□□□□ 0.78
RTCAO00442 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTCAO00442 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 AC034268.1-201ENST00000441047 882 ntBASIC19.95■□□□□ 0.78
RTCAO00442 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 AC138907.5-202ENST00000569484 235 ntBASIC19.95■□□□□ 0.78
RTCAO00442 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTCAO00442 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.95■□□□□ 0.78
RTCAO00442 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.94■□□□□ 0.78
RTCAO00442 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.94■□□□□ 0.78
RTCAO00442 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTCAO00442 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
RTCAO00442 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTCAO00442 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.94■□□□□ 0.78
RTCAO00442 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms