Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF11BO00300 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.35■□□□□ 0.69
TNFRSF11BO00300 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.35■□□□□ 0.69
TNFRSF11BO00300 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.35■□□□□ 0.69
TNFRSF11BO00300 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 AP005435.1-201ENST00000529293 1178 ntBASIC19.35■□□□□ 0.69
TNFRSF11BO00300 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF11BO00300 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFRSF11BO00300 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF11BO00300 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF11BO00300 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF11BO00300 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF11BO00300 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TNFRSF11BO00300 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TNFRSF11BO00300 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFRSF11BO00300 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 AL138724.1-201ENST00000606771 1088 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms