Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01546A6NGU7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01546A6NGU7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 AP000974.1-201ENST00000623909 2387 ntBASIC14.84□□□□□ -0.03
LINC01546A6NGU7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
LINC01546A6NGU7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
LINC01546A6NGU7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC01546A6NGU7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01546A6NGU7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
LINC01546A6NGU7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC01546A6NGU7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC01546A6NGU7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 AP004607.7-201ENST00000527152 1677 ntBASIC14.82□□□□□ -0.04
LINC01546A6NGU7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
LINC01546A6NGU7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms