Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 AC092171.4-201ENST00000609130 632 ntBASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV27A0A0K0K1C4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 AC027702.1-201ENST00000563810 1770 ntBASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 AC020907.5-201ENST00000624372 1936 ntBASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 AC007225.1-201ENST00000566331 1836 ntBASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV27A0A0K0K1C4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV27A0A0K0K1C4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 AP005435.1-201ENST00000529293 1178 ntBASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 AC010525.1-201ENST00000585559 441 ntBASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV27A0A0K0K1C4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.77□□□□□ -0.04
TRBV27A0A0K0K1C4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV27A0A0K0K1C4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms