Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 AL162377.1-201ENST00000618844 1793 ntBASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV12-1A0A0B4J245 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV12-1A0A0B4J245 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV12-1A0A0B4J245 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV12-1A0A0B4J245 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV12-1A0A0B4J245 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV12-1A0A0B4J245 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 SNX5-217ENST00000606557 1087 ntBASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV12-1A0A0B4J245 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-1A0A0B4J245 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AC098818.2-201ENST00000564925 2320 ntBASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 KRT18P24-201ENST00000344739 1156 ntBASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AC007225.1-201ENST00000566331 1836 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms