Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGA11Q9Y5H2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
PCDHGA11Q9Y5H2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA11Q9Y5H2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA11Q9Y5H2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHGA11Q9Y5H2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHGA11Q9Y5H2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PCDHGA11Q9Y5H2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGA11Q9Y5H2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA11Q9Y5H2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA11Q9Y5H2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA11Q9Y5H2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA11Q9Y5H2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA11Q9Y5H2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA11Q9Y5H2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA11Q9Y5H2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGA11Q9Y5H2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA11Q9Y5H2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDHGA11Q9Y5H2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA11Q9Y5H2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PCDHGA11Q9Y5H2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA11Q9Y5H2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGA11Q9Y5H2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA11Q9Y5H2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGA11Q9Y5H2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHGA11Q9Y5H2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.64■■□□□ 1.69
PCDHGA11Q9Y5H2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHGA11Q9Y5H2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHGA11Q9Y5H2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHGA11Q9Y5H2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA11Q9Y5H2 AC097358.2-201ENST00000607541 1159 ntBASIC25.62■■□□□ 1.69
PCDHGA11Q9Y5H2 ST7-AS1-201ENST00000456775 1889 ntBASIC25.61■■□□□ 1.69
PCDHGA11Q9Y5H2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA11Q9Y5H2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA11Q9Y5H2 AC136428.2-201ENST00000563187 214 ntBASIC25.6■■□□□ 1.69
PCDHGA11Q9Y5H2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA11Q9Y5H2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA11Q9Y5H2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGA11Q9Y5H2 AL135925.1-201ENST00000605920 1701 ntBASIC25.59■■□□□ 1.69
PCDHGA11Q9Y5H2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PCDHGA11Q9Y5H2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PCDHGA11Q9Y5H2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
PCDHGA11Q9Y5H2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGA11Q9Y5H2 AL391121.1-201ENST00000607967 1349 ntBASIC25.58■■□□□ 1.69
PCDHGA11Q9Y5H2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA11Q9Y5H2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
PCDHGA11Q9Y5H2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA11Q9Y5H2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA11Q9Y5H2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA11Q9Y5H2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA11Q9Y5H2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA11Q9Y5H2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHGA11Q9Y5H2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA11Q9Y5H2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA11Q9Y5H2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.54■■□□□ 1.68
PCDHGA11Q9Y5H2 CAHM-201ENST00000604200 896 ntBASIC25.54■■□□□ 1.68
PCDHGA11Q9Y5H2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHGA11Q9Y5H2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHGA11Q9Y5H2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA11Q9Y5H2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA11Q9Y5H2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA11Q9Y5H2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA11Q9Y5H2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA11Q9Y5H2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA11Q9Y5H2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHGA11Q9Y5H2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA11Q9Y5H2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
PCDHGA11Q9Y5H2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA11Q9Y5H2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA11Q9Y5H2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA11Q9Y5H2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHGA11Q9Y5H2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA11Q9Y5H2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA11Q9Y5H2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA11Q9Y5H2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA11Q9Y5H2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA11Q9Y5H2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHGA11Q9Y5H2 AC139426.1-201ENST00000568218 2529 ntBASIC25.45■■□□□ 1.66
PCDHGA11Q9Y5H2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA11Q9Y5H2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA11Q9Y5H2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA11Q9Y5H2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA11Q9Y5H2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA11Q9Y5H2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA11Q9Y5H2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGA11Q9Y5H2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
PCDHGA11Q9Y5H2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
PCDHGA11Q9Y5H2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
PCDHGA11Q9Y5H2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA11Q9Y5H2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PCDHGA11Q9Y5H2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDHGA11Q9Y5H2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGA11Q9Y5H2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGA11Q9Y5H2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PCDHGA11Q9Y5H2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms