Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RBFOX1Q9NWB1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.37■■□□□ 1.33
RBFOX1Q9NWB1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.36■■□□□ 1.33
RBFOX1Q9NWB1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.35■■□□□ 1.33
RBFOX1Q9NWB1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.34■■□□□ 1.33
RBFOX1Q9NWB1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RBFOX1Q9NWB1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 AC142086.6-201ENST00000621154 1765 ntBASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RBFOX1Q9NWB1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RBFOX1Q9NWB1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RBFOX1Q9NWB1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.31■■□□□ 1.32
RBFOX1Q9NWB1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 AC135731.1-201ENST00000569415 2548 ntBASIC23.3■■□□□ 1.32
RBFOX1Q9NWB1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RBFOX1Q9NWB1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RBFOX1Q9NWB1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RBFOX1Q9NWB1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RBFOX1Q9NWB1 ST7-AS1-201ENST00000456775 1889 ntBASIC23.24■■□□□ 1.31
RBFOX1Q9NWB1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RBFOX1Q9NWB1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.23■■□□□ 1.31
RBFOX1Q9NWB1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RBFOX1Q9NWB1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RBFOX1Q9NWB1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.21■■□□□ 1.31
RBFOX1Q9NWB1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBFOX1Q9NWB1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RBFOX1Q9NWB1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RBFOX1Q9NWB1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RBFOX1Q9NWB1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RBFOX1Q9NWB1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBFOX1Q9NWB1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBFOX1Q9NWB1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.14■■□□□ 1.3
RBFOX1Q9NWB1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBFOX1Q9NWB1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RBFOX1Q9NWB1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBFOX1Q9NWB1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBFOX1Q9NWB1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.09■■□□□ 1.29
RBFOX1Q9NWB1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RBFOX1Q9NWB1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RBFOX1Q9NWB1 AL121749.1-202ENST00000609313 2153 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms