Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
VAT1LQ9HCJ6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
VAT1LQ9HCJ6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
VAT1LQ9HCJ6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
VAT1LQ9HCJ6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
VAT1LQ9HCJ6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
VAT1LQ9HCJ6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.98■■■□□ 2.55
VAT1LQ9HCJ6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
VAT1LQ9HCJ6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
VAT1LQ9HCJ6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.97■■■□□ 2.55
VAT1LQ9HCJ6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.96■■■□□ 2.55
VAT1LQ9HCJ6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
VAT1LQ9HCJ6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
VAT1LQ9HCJ6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.94■■■□□ 2.54
VAT1LQ9HCJ6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VAT1LQ9HCJ6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
VAT1LQ9HCJ6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
VAT1LQ9HCJ6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
VAT1LQ9HCJ6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.91■■■□□ 2.54
VAT1LQ9HCJ6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
VAT1LQ9HCJ6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
VAT1LQ9HCJ6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.9■■■□□ 2.54
VAT1LQ9HCJ6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.89■■■□□ 2.54
VAT1LQ9HCJ6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VAT1LQ9HCJ6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VAT1LQ9HCJ6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
VAT1LQ9HCJ6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
VAT1LQ9HCJ6 AC044849.2-201ENST00000606596 710 ntBASIC30.88■■■□□ 2.53
VAT1LQ9HCJ6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
VAT1LQ9HCJ6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
VAT1LQ9HCJ6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
VAT1LQ9HCJ6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.86■■■□□ 2.53
VAT1LQ9HCJ6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.86■■■□□ 2.53
VAT1LQ9HCJ6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VAT1LQ9HCJ6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VAT1LQ9HCJ6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.84■■■□□ 2.53
VAT1LQ9HCJ6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VAT1LQ9HCJ6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
VAT1LQ9HCJ6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.83■■■□□ 2.53
VAT1LQ9HCJ6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.82■■■□□ 2.52
VAT1LQ9HCJ6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VAT1LQ9HCJ6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VAT1LQ9HCJ6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
VAT1LQ9HCJ6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
VAT1LQ9HCJ6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
VAT1LQ9HCJ6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
VAT1LQ9HCJ6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
VAT1LQ9HCJ6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.79■■■□□ 2.52
VAT1LQ9HCJ6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
VAT1LQ9HCJ6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.78■■■□□ 2.52
VAT1LQ9HCJ6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VAT1LQ9HCJ6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.78■■■□□ 2.52
VAT1LQ9HCJ6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VAT1LQ9HCJ6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
VAT1LQ9HCJ6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
VAT1LQ9HCJ6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
VAT1LQ9HCJ6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
VAT1LQ9HCJ6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
VAT1LQ9HCJ6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
VAT1LQ9HCJ6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
VAT1LQ9HCJ6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
VAT1LQ9HCJ6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.75■■■□□ 2.51
VAT1LQ9HCJ6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.74■■■□□ 2.51
VAT1LQ9HCJ6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.73■■■□□ 2.51
VAT1LQ9HCJ6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
VAT1LQ9HCJ6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
VAT1LQ9HCJ6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
VAT1LQ9HCJ6 MIR6090-201ENST00000622481 60 ntBASIC30.71■■■□□ 2.51
VAT1LQ9HCJ6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
VAT1LQ9HCJ6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
VAT1LQ9HCJ6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.69■■■□□ 2.5
VAT1LQ9HCJ6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
VAT1LQ9HCJ6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
VAT1LQ9HCJ6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.68■■■□□ 2.5
VAT1LQ9HCJ6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
VAT1LQ9HCJ6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
VAT1LQ9HCJ6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
VAT1LQ9HCJ6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.67■■■□□ 2.5
VAT1LQ9HCJ6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 AC108673.1-201ENST00000510422 1159 ntBASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
VAT1LQ9HCJ6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
VAT1LQ9HCJ6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
VAT1LQ9HCJ6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
VAT1LQ9HCJ6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
VAT1LQ9HCJ6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
VAT1LQ9HCJ6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.63■■■□□ 2.49
VAT1LQ9HCJ6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
VAT1LQ9HCJ6 ABHD17AP4-201ENST00000411545 909 ntBASIC30.62■■■□□ 2.49
VAT1LQ9HCJ6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
VAT1LQ9HCJ6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
VAT1LQ9HCJ6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms