Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
MINDY3Q9H8M7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
MINDY3Q9H8M7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
MINDY3Q9H8M7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
MINDY3Q9H8M7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.39■■■□□ 2.3
MINDY3Q9H8M7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.39■■■□□ 2.3
MINDY3Q9H8M7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
MINDY3Q9H8M7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
MINDY3Q9H8M7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.36■■■□□ 2.29
MINDY3Q9H8M7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
MINDY3Q9H8M7 AL161658.1-201ENST00000623641 1967 ntBASIC29.35■■■□□ 2.29
MINDY3Q9H8M7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
MINDY3Q9H8M7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.33■■■□□ 2.29
MINDY3Q9H8M7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
MINDY3Q9H8M7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.32■■■□□ 2.28
MINDY3Q9H8M7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
MINDY3Q9H8M7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MINDY3Q9H8M7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
MINDY3Q9H8M7 ABHD17AP4-201ENST00000411545 909 ntBASIC29.3■■■□□ 2.28
MINDY3Q9H8M7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
MINDY3Q9H8M7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
MINDY3Q9H8M7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
MINDY3Q9H8M7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.27■■■□□ 2.28
MINDY3Q9H8M7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
MINDY3Q9H8M7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
MINDY3Q9H8M7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
MINDY3Q9H8M7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
MINDY3Q9H8M7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
MINDY3Q9H8M7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.25■■■□□ 2.27
MINDY3Q9H8M7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
MINDY3Q9H8M7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.25■■■□□ 2.27
MINDY3Q9H8M7 MIR6090-201ENST00000622481 60 ntBASIC29.24■■■□□ 2.27
MINDY3Q9H8M7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
MINDY3Q9H8M7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
MINDY3Q9H8M7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
MINDY3Q9H8M7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
MINDY3Q9H8M7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
MINDY3Q9H8M7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
MINDY3Q9H8M7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.22■■■□□ 2.27
MINDY3Q9H8M7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
MINDY3Q9H8M7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
MINDY3Q9H8M7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
MINDY3Q9H8M7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
MINDY3Q9H8M7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
MINDY3Q9H8M7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
MINDY3Q9H8M7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.19■■■□□ 2.26
MINDY3Q9H8M7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.19■■■□□ 2.26
MINDY3Q9H8M7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.19■■■□□ 2.26
MINDY3Q9H8M7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.19■■■□□ 2.26
MINDY3Q9H8M7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.18■■■□□ 2.26
MINDY3Q9H8M7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.18■■■□□ 2.26
MINDY3Q9H8M7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
MINDY3Q9H8M7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
MINDY3Q9H8M7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
MINDY3Q9H8M7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
MINDY3Q9H8M7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.16■■■□□ 2.26
MINDY3Q9H8M7 AC108673.1-201ENST00000510422 1159 ntBASIC29.16■■■□□ 2.26
MINDY3Q9H8M7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.16■■■□□ 2.26
MINDY3Q9H8M7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
MINDY3Q9H8M7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
MINDY3Q9H8M7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.15■■■□□ 2.26
MINDY3Q9H8M7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
MINDY3Q9H8M7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
MINDY3Q9H8M7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.25
MINDY3Q9H8M7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
MINDY3Q9H8M7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
MINDY3Q9H8M7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.13■■■□□ 2.25
MINDY3Q9H8M7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.13■■■□□ 2.25
MINDY3Q9H8M7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
MINDY3Q9H8M7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
MINDY3Q9H8M7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
MINDY3Q9H8M7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
MINDY3Q9H8M7 MIR7108-201ENST00000614319 87 ntBASIC29.12■■■□□ 2.25
MINDY3Q9H8M7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.11■■■□□ 2.25
MINDY3Q9H8M7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.11■■■□□ 2.25
MINDY3Q9H8M7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
MINDY3Q9H8M7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
MINDY3Q9H8M7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
MINDY3Q9H8M7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
MINDY3Q9H8M7 DUX4L29-201ENST00000425409 679 ntBASIC29.1■■■□□ 2.25
MINDY3Q9H8M7 AC021231.2-201ENST00000594613 730 ntBASIC29.1■■■□□ 2.25
MINDY3Q9H8M7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
MINDY3Q9H8M7 ZNRF2P2-203ENST00000454624 420 ntBASIC29.09■■■□□ 2.25
MINDY3Q9H8M7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.08■■■□□ 2.25
MINDY3Q9H8M7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
MINDY3Q9H8M7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
MINDY3Q9H8M7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
MINDY3Q9H8M7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
MINDY3Q9H8M7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
MINDY3Q9H8M7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.05■■■□□ 2.24
MINDY3Q9H8M7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
MINDY3Q9H8M7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms