Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.22■■■□□ 2.43
CDHR1Q96JP9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.22■■■□□ 2.43
CDHR1Q96JP9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CDHR1Q96JP9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.22■■■□□ 2.43
CDHR1Q96JP9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDHR1Q96JP9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDHR1Q96JP9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.19■■■□□ 2.42
CDHR1Q96JP9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.18■■■□□ 2.42
CDHR1Q96JP9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDHR1Q96JP9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDHR1Q96JP9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDHR1Q96JP9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CDHR1Q96JP9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CDHR1Q96JP9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDHR1Q96JP9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CDHR1Q96JP9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CDHR1Q96JP9 ABHD17AP4-201ENST00000411545 909 ntBASIC30.12■■■□□ 2.41
CDHR1Q96JP9 AC108673.1-201ENST00000510422 1159 ntBASIC30.12■■■□□ 2.41
CDHR1Q96JP9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.11■■■□□ 2.41
CDHR1Q96JP9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDHR1Q96JP9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDHR1Q96JP9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDHR1Q96JP9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDHR1Q96JP9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.08■■■□□ 2.41
CDHR1Q96JP9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDHR1Q96JP9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CDHR1Q96JP9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.06■■■□□ 2.4
CDHR1Q96JP9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDHR1Q96JP9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDHR1Q96JP9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.05■■■□□ 2.4
CDHR1Q96JP9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDHR1Q96JP9 AL161658.1-201ENST00000623641 1967 ntBASIC30.04■■■□□ 2.4
CDHR1Q96JP9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CDHR1Q96JP9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDHR1Q96JP9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDHR1Q96JP9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDHR1Q96JP9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.01■■■□□ 2.39
CDHR1Q96JP9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDHR1Q96JP9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDHR1Q96JP9 DUX4L29-201ENST00000425409 679 ntBASIC30■■■□□ 2.39
CDHR1Q96JP9 MIR6090-201ENST00000622481 60 ntBASIC30■■■□□ 2.39
CDHR1Q96JP9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDHR1Q96JP9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDHR1Q96JP9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CDHR1Q96JP9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.99■■■□□ 2.39
CDHR1Q96JP9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.99■■■□□ 2.39
CDHR1Q96JP9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDHR1Q96JP9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CDHR1Q96JP9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CDHR1Q96JP9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDHR1Q96JP9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.97■■■□□ 2.39
CDHR1Q96JP9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.96■■■□□ 2.39
CDHR1Q96JP9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDHR1Q96JP9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CDHR1Q96JP9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CDHR1Q96JP9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.95■■■□□ 2.39
CDHR1Q96JP9 MIR7108-201ENST00000614319 87 ntBASIC29.95■■■□□ 2.39
CDHR1Q96JP9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
CDHR1Q96JP9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
CDHR1Q96JP9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDHR1Q96JP9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.93■■■□□ 2.38
CDHR1Q96JP9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDHR1Q96JP9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CDHR1Q96JP9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CDHR1Q96JP9 ZNRF2P2-203ENST00000454624 420 ntBASIC29.92■■■□□ 2.38
CDHR1Q96JP9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.91■■■□□ 2.38
CDHR1Q96JP9 AC021231.2-201ENST00000594613 730 ntBASIC29.9■■■□□ 2.38
CDHR1Q96JP9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDHR1Q96JP9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CDHR1Q96JP9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CDHR1Q96JP9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.9■■■□□ 2.38
CDHR1Q96JP9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.9■■■□□ 2.38
CDHR1Q96JP9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CDHR1Q96JP9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CDHR1Q96JP9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.89■■■□□ 2.38
CDHR1Q96JP9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CDHR1Q96JP9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDHR1Q96JP9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
CDHR1Q96JP9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDHR1Q96JP9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CDHR1Q96JP9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.87■■■□□ 2.37
CDHR1Q96JP9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CDHR1Q96JP9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDHR1Q96JP9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CDHR1Q96JP9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDHR1Q96JP9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.85■■■□□ 2.37
CDHR1Q96JP9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDHR1Q96JP9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms