Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF183Q96D59 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF183Q96D59 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF183Q96D59 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF183Q96D59 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF183Q96D59 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF183Q96D59 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF183Q96D59 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF183Q96D59 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF183Q96D59 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF183Q96D59 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF183Q96D59 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF183Q96D59 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF183Q96D59 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF183Q96D59 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF183Q96D59 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF183Q96D59 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF183Q96D59 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF183Q96D59 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF183Q96D59 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF183Q96D59 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF183Q96D59 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF183Q96D59 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF183Q96D59 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF183Q96D59 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF183Q96D59 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF183Q96D59 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF183Q96D59 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF183Q96D59 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF183Q96D59 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF183Q96D59 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF183Q96D59 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF183Q96D59 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF183Q96D59 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF183Q96D59 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF183Q96D59 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF183Q96D59 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF183Q96D59 ABHD17AP4-201ENST00000411545 909 ntBASIC19.43■□□□□ 0.7
RNF183Q96D59 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF183Q96D59 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF183Q96D59 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF183Q96D59 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF183Q96D59 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF183Q96D59 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF183Q96D59 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF183Q96D59 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF183Q96D59 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF183Q96D59 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF183Q96D59 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF183Q96D59 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF183Q96D59 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF183Q96D59 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF183Q96D59 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF183Q96D59 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF183Q96D59 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF183Q96D59 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF183Q96D59 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF183Q96D59 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF183Q96D59 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF183Q96D59 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RNF183Q96D59 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF183Q96D59 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF183Q96D59 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF183Q96D59 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF183Q96D59 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF183Q96D59 AC108673.1-201ENST00000510422 1159 ntBASIC19.36■□□□□ 0.69
RNF183Q96D59 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF183Q96D59 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.34■□□□□ 0.69
RNF183Q96D59 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF183Q96D59 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RNF183Q96D59 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF183Q96D59 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RNF183Q96D59 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF183Q96D59 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF183Q96D59 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RNF183Q96D59 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF183Q96D59 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF183Q96D59 DUX4L29-201ENST00000425409 679 ntBASIC19.32■□□□□ 0.68
RNF183Q96D59 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF183Q96D59 MIR7108-201ENST00000614319 87 ntBASIC19.32■□□□□ 0.68
RNF183Q96D59 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF183Q96D59 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF183Q96D59 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF183Q96D59 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF183Q96D59 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF183Q96D59 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF183Q96D59 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF183Q96D59 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF183Q96D59 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF183Q96D59 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF183Q96D59 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF183Q96D59 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RNF183Q96D59 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF183Q96D59 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF183Q96D59 ZNRF2P2-203ENST00000454624 420 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms