Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.68■■■□□ 2.66
STAG1Q8WVM7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG1Q8WVM7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG1Q8WVM7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG1Q8WVM7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG1Q8WVM7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
STAG1Q8WVM7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
STAG1Q8WVM7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
STAG1Q8WVM7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.65■■■□□ 2.66
STAG1Q8WVM7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.65■■■□□ 2.66
STAG1Q8WVM7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
STAG1Q8WVM7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 MIR3665-201ENST00000578708 105 ntBASIC31.64■■■□□ 2.66
STAG1Q8WVM7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
STAG1Q8WVM7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
STAG1Q8WVM7 AC005559.1-201ENST00000589661 871 ntBASIC31.63■■■□□ 2.65
STAG1Q8WVM7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
STAG1Q8WVM7 DUX4L28-201ENST00000623687 678 ntBASIC31.61■■■□□ 2.65
STAG1Q8WVM7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG1Q8WVM7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
STAG1Q8WVM7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.59■■■□□ 2.65
STAG1Q8WVM7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
STAG1Q8WVM7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
STAG1Q8WVM7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
STAG1Q8WVM7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.57■■■□□ 2.64
STAG1Q8WVM7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
STAG1Q8WVM7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
STAG1Q8WVM7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
STAG1Q8WVM7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.55■■■□□ 2.64
STAG1Q8WVM7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.55■■■□□ 2.64
STAG1Q8WVM7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.54■■■□□ 2.64
STAG1Q8WVM7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.53■■■□□ 2.64
STAG1Q8WVM7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
STAG1Q8WVM7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
STAG1Q8WVM7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
STAG1Q8WVM7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
STAG1Q8WVM7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
STAG1Q8WVM7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
STAG1Q8WVM7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
STAG1Q8WVM7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
STAG1Q8WVM7 AC087741.3-201ENST00000624270 1347 ntBASIC31.49■■■□□ 2.63
STAG1Q8WVM7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
STAG1Q8WVM7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
STAG1Q8WVM7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
STAG1Q8WVM7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
STAG1Q8WVM7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.47■■■□□ 2.63
STAG1Q8WVM7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
STAG1Q8WVM7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.46■■■□□ 2.63
STAG1Q8WVM7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
STAG1Q8WVM7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.45■■■□□ 2.63
STAG1Q8WVM7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.45■■■□□ 2.63
STAG1Q8WVM7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.45■■■□□ 2.63
STAG1Q8WVM7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
STAG1Q8WVM7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
STAG1Q8WVM7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
STAG1Q8WVM7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
STAG1Q8WVM7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
STAG1Q8WVM7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.43■■■□□ 2.62
STAG1Q8WVM7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
STAG1Q8WVM7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.42■■■□□ 2.62
STAG1Q8WVM7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
STAG1Q8WVM7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.42■■■□□ 2.62
STAG1Q8WVM7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.42■■■□□ 2.62
STAG1Q8WVM7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
STAG1Q8WVM7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
STAG1Q8WVM7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
STAG1Q8WVM7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
STAG1Q8WVM7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.4■■■□□ 2.62
STAG1Q8WVM7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.39■■■□□ 2.62
STAG1Q8WVM7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
STAG1Q8WVM7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.37■■■□□ 2.61
STAG1Q8WVM7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
STAG1Q8WVM7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
STAG1Q8WVM7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
STAG1Q8WVM7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.34■■■□□ 2.61
STAG1Q8WVM7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
STAG1Q8WVM7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
STAG1Q8WVM7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
STAG1Q8WVM7 AC044849.2-201ENST00000606596 710 ntBASIC31.32■■■□□ 2.6
STAG1Q8WVM7 AL135925.1-201ENST00000605920 1701 ntBASIC31.32■■■□□ 2.6
STAG1Q8WVM7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
STAG1Q8WVM7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
STAG1Q8WVM7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
STAG1Q8WVM7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
STAG1Q8WVM7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
STAG1Q8WVM7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.3■■■□□ 2.6
STAG1Q8WVM7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
STAG1Q8WVM7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
STAG1Q8WVM7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
STAG1Q8WVM7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
STAG1Q8WVM7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms