Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM116Q8NCL8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM116Q8NCL8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM116Q8NCL8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TMEM116Q8NCL8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.96■□□□□ 0.95
TMEM116Q8NCL8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM116Q8NCL8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM116Q8NCL8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM116Q8NCL8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.95■□□□□ 0.94
TMEM116Q8NCL8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM116Q8NCL8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM116Q8NCL8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMEM116Q8NCL8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM116Q8NCL8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM116Q8NCL8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM116Q8NCL8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM116Q8NCL8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
TMEM116Q8NCL8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM116Q8NCL8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
TMEM116Q8NCL8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM116Q8NCL8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM116Q8NCL8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM116Q8NCL8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TMEM116Q8NCL8 AL135925.1-201ENST00000605920 1701 ntBASIC20.87■□□□□ 0.93
TMEM116Q8NCL8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TMEM116Q8NCL8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM116Q8NCL8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM116Q8NCL8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM116Q8NCL8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM116Q8NCL8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM116Q8NCL8 AC139426.1-201ENST00000568218 2529 ntBASIC20.84■□□□□ 0.93
TMEM116Q8NCL8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM116Q8NCL8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM116Q8NCL8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM116Q8NCL8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM116Q8NCL8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 WASH5P-204ENST00000632292 975 ntBASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TMEM116Q8NCL8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM116Q8NCL8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM116Q8NCL8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM116Q8NCL8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM116Q8NCL8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TMEM116Q8NCL8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM116Q8NCL8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM116Q8NCL8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TMEM116Q8NCL8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM116Q8NCL8 RARRES2P7-201ENST00000567349 469 ntBASIC20.77■□□□□ 0.92
TMEM116Q8NCL8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TMEM116Q8NCL8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM116Q8NCL8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM116Q8NCL8 AL133380.1-201ENST00000506013 324 ntBASIC20.76■□□□□ 0.91
TMEM116Q8NCL8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TMEM116Q8NCL8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM116Q8NCL8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM116Q8NCL8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.74■□□□□ 0.91
TMEM116Q8NCL8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM116Q8NCL8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM116Q8NCL8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM116Q8NCL8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM116Q8NCL8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM116Q8NCL8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEM116Q8NCL8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM116Q8NCL8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM116Q8NCL8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM116Q8NCL8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM116Q8NCL8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM116Q8NCL8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM116Q8NCL8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM116Q8NCL8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM116Q8NCL8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM116Q8NCL8 SETD8P1-201ENST00000623146 1180 ntBASIC20.67■□□□□ 0.9
TMEM116Q8NCL8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM116Q8NCL8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM116Q8NCL8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM116Q8NCL8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM116Q8NCL8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM116Q8NCL8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM116Q8NCL8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM116Q8NCL8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM116Q8NCL8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM116Q8NCL8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM116Q8NCL8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM116Q8NCL8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM116Q8NCL8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM116Q8NCL8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM116Q8NCL8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms