Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
EXD3Q8N9H8 MIR3648-2-201ENST00000581792 180 ntBASIC25.22■■□□□ 1.63
EXD3Q8N9H8 MIR3648-1-201ENST00000615959 180 ntBASIC25.22■■□□□ 1.63
EXD3Q8N9H8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.22■■□□□ 1.63
EXD3Q8N9H8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
EXD3Q8N9H8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
EXD3Q8N9H8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.21■■□□□ 1.63
EXD3Q8N9H8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.21■■□□□ 1.63
EXD3Q8N9H8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
EXD3Q8N9H8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
EXD3Q8N9H8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.2■■□□□ 1.62
EXD3Q8N9H8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.19■■□□□ 1.62
EXD3Q8N9H8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
EXD3Q8N9H8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
EXD3Q8N9H8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
EXD3Q8N9H8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
EXD3Q8N9H8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.15■■□□□ 1.62
EXD3Q8N9H8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
EXD3Q8N9H8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.15■■□□□ 1.62
EXD3Q8N9H8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
EXD3Q8N9H8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.14■■□□□ 1.62
EXD3Q8N9H8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
EXD3Q8N9H8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
EXD3Q8N9H8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
EXD3Q8N9H8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.11■■□□□ 1.61
EXD3Q8N9H8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
EXD3Q8N9H8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
EXD3Q8N9H8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
EXD3Q8N9H8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
EXD3Q8N9H8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
EXD3Q8N9H8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
EXD3Q8N9H8 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.07■■□□□ 1.6
EXD3Q8N9H8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
EXD3Q8N9H8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.06■■□□□ 1.6
EXD3Q8N9H8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
EXD3Q8N9H8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
EXD3Q8N9H8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.05■■□□□ 1.6
EXD3Q8N9H8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.05■■□□□ 1.6
EXD3Q8N9H8 CR559946.2-201ENST00000623684 991 ntBASIC25.05■■□□□ 1.6
EXD3Q8N9H8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
EXD3Q8N9H8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.04■■□□□ 1.6
EXD3Q8N9H8 DUX4L11-201ENST00000611504 1267 ntBASIC25.03■■□□□ 1.6
EXD3Q8N9H8 DUX4L12-201ENST00000614593 1267 ntBASIC25.03■■□□□ 1.6
EXD3Q8N9H8 DUX4L14-201ENST00000621227 1267 ntBASIC25.03■■□□□ 1.6
EXD3Q8N9H8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
EXD3Q8N9H8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
EXD3Q8N9H8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
EXD3Q8N9H8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
EXD3Q8N9H8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.02■■□□□ 1.6
EXD3Q8N9H8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
EXD3Q8N9H8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
EXD3Q8N9H8 MIR6090-201ENST00000622481 60 ntBASIC25.01■■□□□ 1.59
EXD3Q8N9H8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
EXD3Q8N9H8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25■■□□□ 1.59
EXD3Q8N9H8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25■■□□□ 1.59
EXD3Q8N9H8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25■■□□□ 1.59
EXD3Q8N9H8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.99■■□□□ 1.59
EXD3Q8N9H8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
EXD3Q8N9H8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
EXD3Q8N9H8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
EXD3Q8N9H8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.98■■□□□ 1.59
EXD3Q8N9H8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
EXD3Q8N9H8 AC108673.1-201ENST00000510422 1159 ntBASIC24.97■■□□□ 1.59
EXD3Q8N9H8 LINC01971-201ENST00000617888 1048 ntBASIC24.97■■□□□ 1.59
EXD3Q8N9H8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.97■■□□□ 1.59
EXD3Q8N9H8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
EXD3Q8N9H8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
EXD3Q8N9H8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
EXD3Q8N9H8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.96■■□□□ 1.59
EXD3Q8N9H8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.96■■□□□ 1.59
EXD3Q8N9H8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
EXD3Q8N9H8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
EXD3Q8N9H8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
EXD3Q8N9H8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
EXD3Q8N9H8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
EXD3Q8N9H8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
EXD3Q8N9H8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
EXD3Q8N9H8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
EXD3Q8N9H8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.93■■□□□ 1.58
EXD3Q8N9H8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
EXD3Q8N9H8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
EXD3Q8N9H8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
EXD3Q8N9H8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
EXD3Q8N9H8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.92■■□□□ 1.58
EXD3Q8N9H8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
EXD3Q8N9H8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
EXD3Q8N9H8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
EXD3Q8N9H8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.91■■□□□ 1.58
EXD3Q8N9H8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
EXD3Q8N9H8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
EXD3Q8N9H8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.89■■□□□ 1.58
EXD3Q8N9H8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.89■■□□□ 1.58
EXD3Q8N9H8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms