Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 MIR3665-201ENST00000578708 105 ntBASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.52■■□□□ 1.84
TRAM1L1Q8N609 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRAM1L1Q8N609 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRAM1L1Q8N609 AL162393.1-201ENST00000437852 946 ntBASIC26.5■■□□□ 1.83
TRAM1L1Q8N609 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRAM1L1Q8N609 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRAM1L1Q8N609 DUX4L28-201ENST00000623687 678 ntBASIC26.49■■□□□ 1.83
TRAM1L1Q8N609 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRAM1L1Q8N609 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRAM1L1Q8N609 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRAM1L1Q8N609 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRAM1L1Q8N609 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.46■■□□□ 1.83
TRAM1L1Q8N609 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.46■■□□□ 1.83
TRAM1L1Q8N609 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRAM1L1Q8N609 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.45■■□□□ 1.82
TRAM1L1Q8N609 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.45■■□□□ 1.82
TRAM1L1Q8N609 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.44■■□□□ 1.82
TRAM1L1Q8N609 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
TRAM1L1Q8N609 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.43■■□□□ 1.82
TRAM1L1Q8N609 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRAM1L1Q8N609 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRAM1L1Q8N609 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRAM1L1Q8N609 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
TRAM1L1Q8N609 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
TRAM1L1Q8N609 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.42■■□□□ 1.82
TRAM1L1Q8N609 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRAM1L1Q8N609 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.41■■□□□ 1.82
TRAM1L1Q8N609 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRAM1L1Q8N609 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRAM1L1Q8N609 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.39■■□□□ 1.82
TRAM1L1Q8N609 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRAM1L1Q8N609 RPS2P35-201ENST00000443417 897 ntBASIC26.39■■□□□ 1.82
TRAM1L1Q8N609 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.39■■□□□ 1.82
TRAM1L1Q8N609 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.38■■□□□ 1.81
TRAM1L1Q8N609 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRAM1L1Q8N609 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRAM1L1Q8N609 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRAM1L1Q8N609 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRAM1L1Q8N609 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.37■■□□□ 1.81
TRAM1L1Q8N609 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRAM1L1Q8N609 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRAM1L1Q8N609 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRAM1L1Q8N609 AC087741.3-201ENST00000624270 1347 ntBASIC26.36■■□□□ 1.81
TRAM1L1Q8N609 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRAM1L1Q8N609 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRAM1L1Q8N609 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRAM1L1Q8N609 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRAM1L1Q8N609 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.33■■□□□ 1.81
TRAM1L1Q8N609 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TRAM1L1Q8N609 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRAM1L1Q8N609 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
TRAM1L1Q8N609 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRAM1L1Q8N609 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRAM1L1Q8N609 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
TRAM1L1Q8N609 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRAM1L1Q8N609 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRAM1L1Q8N609 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.31■■□□□ 1.8
TRAM1L1Q8N609 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRAM1L1Q8N609 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRAM1L1Q8N609 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.29■■□□□ 1.8
TRAM1L1Q8N609 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.29■■□□□ 1.8
TRAM1L1Q8N609 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.28■■□□□ 1.8
TRAM1L1Q8N609 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRAM1L1Q8N609 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAM1L1Q8N609 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRAM1L1Q8N609 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.27■■□□□ 1.8
TRAM1L1Q8N609 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.26■■□□□ 1.79
TRAM1L1Q8N609 AC044849.2-201ENST00000606596 710 ntBASIC26.26■■□□□ 1.79
TRAM1L1Q8N609 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAM1L1Q8N609 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAM1L1Q8N609 AL135925.1-201ENST00000605920 1701 ntBASIC26.25■■□□□ 1.79
TRAM1L1Q8N609 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
TRAM1L1Q8N609 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TRAM1L1Q8N609 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRAM1L1Q8N609 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
TRAM1L1Q8N609 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRAM1L1Q8N609 AC010864.1-201ENST00000609407 1511 ntBASIC26.21■■□□□ 1.79
TRAM1L1Q8N609 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRAM1L1Q8N609 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAM1L1Q8N609 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TRAM1L1Q8N609 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRAM1L1Q8N609 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRAM1L1Q8N609 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRAM1L1Q8N609 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRAM1L1Q8N609 AC108673.1-201ENST00000510422 1159 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms