Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 DUX4L28-201ENST00000623687 678 ntBASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 AC120057.4-201ENST00000624722 1615 ntBASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00528Q8N1L1 AC044849.2-201ENST00000606596 710 ntBASIC17.3■□□□□ 0.36
LINC00528Q8N1L1 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00528Q8N1L1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00528Q8N1L1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 MIR762-201ENST00000390236 83 ntBASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 AC005559.1-201ENST00000589661 871 ntBASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00528Q8N1L1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00528Q8N1L1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LINC00528Q8N1L1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC00528Q8N1L1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00528Q8N1L1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00528Q8N1L1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00528Q8N1L1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00528Q8N1L1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00528Q8N1L1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00528Q8N1L1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00528Q8N1L1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC00528Q8N1L1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00528Q8N1L1 ABCB10P3-201ENST00000561950 2166 ntBASIC17.25■□□□□ 0.35
LINC00528Q8N1L1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINC00528Q8N1L1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC00528Q8N1L1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00528Q8N1L1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC00528Q8N1L1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00528Q8N1L1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00528Q8N1L1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00528Q8N1L1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00528Q8N1L1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00528Q8N1L1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LINC00528Q8N1L1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00528Q8N1L1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00528Q8N1L1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00528Q8N1L1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00528Q8N1L1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00528Q8N1L1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00528Q8N1L1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00528Q8N1L1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00528Q8N1L1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 HLA-V-202ENST00000446817 847 ntBASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00528Q8N1L1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00528Q8N1L1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.16■□□□□ 0.34
LINC00528Q8N1L1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LINC00528Q8N1L1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINC00528Q8N1L1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00528Q8N1L1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00528Q8N1L1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00528Q8N1L1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LINC00528Q8N1L1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LINC00528Q8N1L1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00528Q8N1L1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC00528Q8N1L1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00528Q8N1L1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00528Q8N1L1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00528Q8N1L1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00528Q8N1L1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00528Q8N1L1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00528Q8N1L1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LINC00528Q8N1L1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00528Q8N1L1 ZNRF2P2-203ENST00000454624 420 ntBASIC17.08■□□□□ 0.32
LINC00528Q8N1L1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
LINC00528Q8N1L1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC00528Q8N1L1 WASH5P-204ENST00000632292 975 ntBASIC17.08■□□□□ 0.32
LINC00528Q8N1L1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC00528Q8N1L1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LINC00528Q8N1L1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00528Q8N1L1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00528Q8N1L1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00528Q8N1L1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00528Q8N1L1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms