Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RP1L1Q8IWN7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.41■■□□□ 1.5
RP1L1Q8IWN7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.39■■□□□ 1.5
RP1L1Q8IWN7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.39■■□□□ 1.49
RP1L1Q8IWN7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RP1L1Q8IWN7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.38■■□□□ 1.49
RP1L1Q8IWN7 WASH5P-204ENST00000632292 975 ntBASIC24.38■■□□□ 1.49
RP1L1Q8IWN7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RP1L1Q8IWN7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RP1L1Q8IWN7 AC108673.1-201ENST00000510422 1159 ntBASIC24.36■■□□□ 1.49
RP1L1Q8IWN7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RP1L1Q8IWN7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RP1L1Q8IWN7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RP1L1Q8IWN7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RP1L1Q8IWN7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.34■■□□□ 1.49
RP1L1Q8IWN7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RP1L1Q8IWN7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RP1L1Q8IWN7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.34■■□□□ 1.49
RP1L1Q8IWN7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.34■■□□□ 1.49
RP1L1Q8IWN7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RP1L1Q8IWN7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.33■■□□□ 1.49
RP1L1Q8IWN7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.33■■□□□ 1.49
RP1L1Q8IWN7 LINC01971-201ENST00000617888 1048 ntBASIC24.33■■□□□ 1.49
RP1L1Q8IWN7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RP1L1Q8IWN7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RP1L1Q8IWN7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.32■■□□□ 1.48
RP1L1Q8IWN7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RP1L1Q8IWN7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.31■■□□□ 1.48
RP1L1Q8IWN7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.29■■□□□ 1.48
RP1L1Q8IWN7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RP1L1Q8IWN7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RP1L1Q8IWN7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RP1L1Q8IWN7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RP1L1Q8IWN7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.27■■□□□ 1.48
RP1L1Q8IWN7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.27■■□□□ 1.48
RP1L1Q8IWN7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RP1L1Q8IWN7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RP1L1Q8IWN7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.25■■□□□ 1.47
RP1L1Q8IWN7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RP1L1Q8IWN7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RP1L1Q8IWN7 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.24■■□□□ 1.47
RP1L1Q8IWN7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 DUX4L11-201ENST00000611504 1267 ntBASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 DUX4L12-201ENST00000614593 1267 ntBASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 DUX4L14-201ENST00000621227 1267 ntBASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.22■■□□□ 1.47
RP1L1Q8IWN7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RP1L1Q8IWN7 MIR6090-201ENST00000622481 60 ntBASIC24.21■■□□□ 1.47
RP1L1Q8IWN7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RP1L1Q8IWN7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.2■■□□□ 1.46
RP1L1Q8IWN7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.2■■□□□ 1.46
RP1L1Q8IWN7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RP1L1Q8IWN7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RP1L1Q8IWN7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RP1L1Q8IWN7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RP1L1Q8IWN7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RP1L1Q8IWN7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RP1L1Q8IWN7 DUX4L13-201ENST00000554103 1267 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L15-201ENST00000611059 1267 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L23-201ENST00000615195 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L24-201ENST00000617576 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L22-201ENST00000618238 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L20-201ENST00000619712 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L21-201ENST00000622058 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L10-201ENST00000622460 1267 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DUX4L25-201ENST00000624915 1269 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 RARRES2P2-201ENST00000394842 485 ntBASIC24.17■■□□□ 1.46
RP1L1Q8IWN7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.15■■□□□ 1.46
RP1L1Q8IWN7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RP1L1Q8IWN7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RP1L1Q8IWN7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RP1L1Q8IWN7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RP1L1Q8IWN7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RP1L1Q8IWN7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.13■■□□□ 1.45
RP1L1Q8IWN7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.12■■□□□ 1.45
RP1L1Q8IWN7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
RP1L1Q8IWN7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
RP1L1Q8IWN7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.1■■□□□ 1.45
RP1L1Q8IWN7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RP1L1Q8IWN7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RP1L1Q8IWN7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RP1L1Q8IWN7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
RP1L1Q8IWN7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.07■■□□□ 1.44
RP1L1Q8IWN7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RP1L1Q8IWN7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.07■■□□□ 1.44
RP1L1Q8IWN7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RP1L1Q8IWN7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RP1L1Q8IWN7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RP1L1Q8IWN7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.05■■□□□ 1.44
RP1L1Q8IWN7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.05■■□□□ 1.44
RP1L1Q8IWN7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RP1L1Q8IWN7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms