Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VRK2Q86Y07 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
VRK2Q86Y07 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VRK2Q86Y07 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
VRK2Q86Y07 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.64■■□□□ 1.54
VRK2Q86Y07 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VRK2Q86Y07 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
VRK2Q86Y07 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VRK2Q86Y07 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VRK2Q86Y07 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
VRK2Q86Y07 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VRK2Q86Y07 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.61■■□□□ 1.53
VRK2Q86Y07 AL135925.1-201ENST00000605920 1701 ntBASIC24.61■■□□□ 1.53
VRK2Q86Y07 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VRK2Q86Y07 AC139426.1-201ENST00000568218 2529 ntBASIC24.61■■□□□ 1.53
VRK2Q86Y07 SETD8P1-201ENST00000623146 1180 ntBASIC24.6■■□□□ 1.53
VRK2Q86Y07 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.6■■□□□ 1.53
VRK2Q86Y07 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
VRK2Q86Y07 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.57■■□□□ 1.52
VRK2Q86Y07 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
VRK2Q86Y07 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VRK2Q86Y07 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
VRK2Q86Y07 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VRK2Q86Y07 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VRK2Q86Y07 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VRK2Q86Y07 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VRK2Q86Y07 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VRK2Q86Y07 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.53■■□□□ 1.52
VRK2Q86Y07 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VRK2Q86Y07 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VRK2Q86Y07 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VRK2Q86Y07 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VRK2Q86Y07 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VRK2Q86Y07 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VRK2Q86Y07 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VRK2Q86Y07 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VRK2Q86Y07 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
VRK2Q86Y07 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VRK2Q86Y07 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VRK2Q86Y07 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
VRK2Q86Y07 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.48■■□□□ 1.51
VRK2Q86Y07 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
VRK2Q86Y07 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.47■■□□□ 1.51
VRK2Q86Y07 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.47■■□□□ 1.51
VRK2Q86Y07 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
VRK2Q86Y07 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VRK2Q86Y07 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
VRK2Q86Y07 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VRK2Q86Y07 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.46■■□□□ 1.51
VRK2Q86Y07 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VRK2Q86Y07 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VRK2Q86Y07 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
VRK2Q86Y07 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
VRK2Q86Y07 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
VRK2Q86Y07 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.45■■□□□ 1.5
VRK2Q86Y07 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
VRK2Q86Y07 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
VRK2Q86Y07 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VRK2Q86Y07 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
VRK2Q86Y07 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.42■■□□□ 1.5
VRK2Q86Y07 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
VRK2Q86Y07 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
VRK2Q86Y07 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VRK2Q86Y07 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VRK2Q86Y07 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VRK2Q86Y07 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
VRK2Q86Y07 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VRK2Q86Y07 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
VRK2Q86Y07 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
VRK2Q86Y07 AC136428.2-201ENST00000563187 214 ntBASIC24.37■■□□□ 1.49
VRK2Q86Y07 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
VRK2Q86Y07 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VRK2Q86Y07 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
VRK2Q86Y07 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.36■■□□□ 1.49
VRK2Q86Y07 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VRK2Q86Y07 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.35■■□□□ 1.49
VRK2Q86Y07 AC097358.2-201ENST00000607541 1159 ntBASIC24.35■■□□□ 1.49
VRK2Q86Y07 AL391121.1-201ENST00000607967 1349 ntBASIC24.35■■□□□ 1.49
VRK2Q86Y07 CAHM-201ENST00000604200 896 ntBASIC24.34■■□□□ 1.49
VRK2Q86Y07 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.33■■□□□ 1.49
VRK2Q86Y07 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VRK2Q86Y07 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.32■■□□□ 1.48
VRK2Q86Y07 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VRK2Q86Y07 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VRK2Q86Y07 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.31■■□□□ 1.48
VRK2Q86Y07 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.31■■□□□ 1.48
VRK2Q86Y07 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
VRK2Q86Y07 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VRK2Q86Y07 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
VRK2Q86Y07 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VRK2Q86Y07 AC010864.1-201ENST00000609407 1511 ntBASIC24.3■■□□□ 1.48
VRK2Q86Y07 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
VRK2Q86Y07 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VRK2Q86Y07 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms