Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.4■■□□□ 1.34
RTTNQ86VV8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTTNQ86VV8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.4■■□□□ 1.34
RTTNQ86VV8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RTTNQ86VV8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTTNQ86VV8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RTTNQ86VV8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTTNQ86VV8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
RTTNQ86VV8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTTNQ86VV8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTTNQ86VV8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
RTTNQ86VV8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTTNQ86VV8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.36■■□□□ 1.33
RTTNQ86VV8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTTNQ86VV8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.36■■□□□ 1.33
RTTNQ86VV8 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.36■■□□□ 1.33
RTTNQ86VV8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTTNQ86VV8 AC139426.1-201ENST00000568218 2529 ntBASIC23.35■■□□□ 1.33
RTTNQ86VV8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.34■■□□□ 1.33
RTTNQ86VV8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.33■■□□□ 1.33
RTTNQ86VV8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.33■■□□□ 1.33
RTTNQ86VV8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTTNQ86VV8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTTNQ86VV8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTTNQ86VV8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RTTNQ86VV8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.32■■□□□ 1.32
RTTNQ86VV8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RTTNQ86VV8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTTNQ86VV8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RTTNQ86VV8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTTNQ86VV8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTTNQ86VV8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTTNQ86VV8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTTNQ86VV8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.28■■□□□ 1.32
RTTNQ86VV8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTTNQ86VV8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTTNQ86VV8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTTNQ86VV8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTTNQ86VV8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.27■■□□□ 1.32
RTTNQ86VV8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.27■■□□□ 1.32
RTTNQ86VV8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTTNQ86VV8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTTNQ86VV8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTTNQ86VV8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTTNQ86VV8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTTNQ86VV8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTTNQ86VV8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.25■■□□□ 1.31
RTTNQ86VV8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTTNQ86VV8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTTNQ86VV8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTTNQ86VV8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RTTNQ86VV8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTTNQ86VV8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTTNQ86VV8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTTNQ86VV8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.22■■□□□ 1.31
RTTNQ86VV8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.21■■□□□ 1.31
RTTNQ86VV8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.21■■□□□ 1.31
RTTNQ86VV8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTTNQ86VV8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
RTTNQ86VV8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTTNQ86VV8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.2■■□□□ 1.3
RTTNQ86VV8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTTNQ86VV8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTTNQ86VV8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.19■■□□□ 1.3
RTTNQ86VV8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTTNQ86VV8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTTNQ86VV8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTTNQ86VV8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTTNQ86VV8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.17■■□□□ 1.3
RTTNQ86VV8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.17■■□□□ 1.3
RTTNQ86VV8 AP006261.1-201ENST00000584783 668 ntBASIC23.16■■□□□ 1.3
RTTNQ86VV8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTTNQ86VV8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTTNQ86VV8 MIR762-201ENST00000390236 83 ntBASIC23.15■■□□□ 1.3
RTTNQ86VV8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTTNQ86VV8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.14■■□□□ 1.29
RTTNQ86VV8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTTNQ86VV8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTTNQ86VV8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTTNQ86VV8 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.13■■□□□ 1.29
RTTNQ86VV8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTTNQ86VV8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RTTNQ86VV8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTTNQ86VV8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.12■■□□□ 1.29
RTTNQ86VV8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RTTNQ86VV8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.12■■□□□ 1.29
RTTNQ86VV8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTTNQ86VV8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.11■■□□□ 1.29
RTTNQ86VV8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTTNQ86VV8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RTTNQ86VV8 AL135925.1-201ENST00000605920 1701 ntBASIC23.11■■□□□ 1.29
RTTNQ86VV8 ST7-AS1-201ENST00000456775 1889 ntBASIC23.1■■□□□ 1.29
RTTNQ86VV8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTTNQ86VV8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTTNQ86VV8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTTNQ86VV8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTTNQ86VV8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTTNQ86VV8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTTNQ86VV8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTTNQ86VV8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms