Protein–RNA interactions for Protein: Q6R6M4

USP17L2, Ubiquitin carboxyl-terminal hydrolase 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L2Q6R6M4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.57■■■□□ 2.64
USP17L2Q6R6M4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L2Q6R6M4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
USP17L2Q6R6M4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
USP17L2Q6R6M4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
USP17L2Q6R6M4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.54■■■□□ 2.64
USP17L2Q6R6M4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP17L2Q6R6M4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.53■■■□□ 2.64
USP17L2Q6R6M4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
USP17L2Q6R6M4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.5■■■□□ 2.63
USP17L2Q6R6M4 HLA-V-202ENST00000446817 847 ntBASIC31.49■■■□□ 2.63
USP17L2Q6R6M4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.49■■■□□ 2.63
USP17L2Q6R6M4 DUX4L29-201ENST00000425409 679 ntBASIC31.48■■■□□ 2.63
USP17L2Q6R6M4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L2Q6R6M4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.47■■■□□ 2.63
USP17L2Q6R6M4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
USP17L2Q6R6M4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.46■■■□□ 2.63
USP17L2Q6R6M4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.45■■■□□ 2.63
USP17L2Q6R6M4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
USP17L2Q6R6M4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
USP17L2Q6R6M4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
USP17L2Q6R6M4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.44■■■□□ 2.62
USP17L2Q6R6M4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP17L2Q6R6M4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP17L2Q6R6M4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
USP17L2Q6R6M4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP17L2Q6R6M4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
USP17L2Q6R6M4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP17L2Q6R6M4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.37■■■□□ 2.61
USP17L2Q6R6M4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.37■■■□□ 2.61
USP17L2Q6R6M4 AC021231.2-201ENST00000594613 730 ntBASIC31.37■■■□□ 2.61
USP17L2Q6R6M4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP17L2Q6R6M4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
USP17L2Q6R6M4 AC108673.1-201ENST00000510422 1159 ntBASIC31.36■■■□□ 2.61
USP17L2Q6R6M4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP17L2Q6R6M4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
USP17L2Q6R6M4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP17L2Q6R6M4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
USP17L2Q6R6M4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP17L2Q6R6M4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
USP17L2Q6R6M4 MIR6090-201ENST00000622481 60 ntBASIC31.33■■■□□ 2.61
USP17L2Q6R6M4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
USP17L2Q6R6M4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP17L2Q6R6M4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.32■■■□□ 2.6
USP17L2Q6R6M4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
USP17L2Q6R6M4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP17L2Q6R6M4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.31■■■□□ 2.6
USP17L2Q6R6M4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.3■■■□□ 2.6
USP17L2Q6R6M4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
USP17L2Q6R6M4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP17L2Q6R6M4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.3■■■□□ 2.6
USP17L2Q6R6M4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
USP17L2Q6R6M4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.28■■■□□ 2.6
USP17L2Q6R6M4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP17L2Q6R6M4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
USP17L2Q6R6M4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP17L2Q6R6M4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
USP17L2Q6R6M4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
USP17L2Q6R6M4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.24■■■□□ 2.59
USP17L2Q6R6M4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
USP17L2Q6R6M4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.21■■■□□ 2.59
USP17L2Q6R6M4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.21■■■□□ 2.59
USP17L2Q6R6M4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
USP17L2Q6R6M4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
USP17L2Q6R6M4 AL161658.1-201ENST00000623641 1967 ntBASIC31.19■■■□□ 2.58
USP17L2Q6R6M4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.19■■■□□ 2.58
USP17L2Q6R6M4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
USP17L2Q6R6M4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
USP17L2Q6R6M4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.16■■■□□ 2.58
USP17L2Q6R6M4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
USP17L2Q6R6M4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.15■■■□□ 2.58
USP17L2Q6R6M4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USP17L2Q6R6M4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
USP17L2Q6R6M4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
USP17L2Q6R6M4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP17L2Q6R6M4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
USP17L2Q6R6M4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
USP17L2Q6R6M4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.12■■■□□ 2.57
USP17L2Q6R6M4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.11■■■□□ 2.57
USP17L2Q6R6M4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
USP17L2Q6R6M4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP17L2Q6R6M4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
USP17L2Q6R6M4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.09■■■□□ 2.57
USP17L2Q6R6M4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP17L2Q6R6M4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms