Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PPP4R3AQ6IN85 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PPP4R3AQ6IN85 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PPP4R3AQ6IN85 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PPP4R3AQ6IN85 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PPP4R3AQ6IN85 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
PPP4R3AQ6IN85 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PPP4R3AQ6IN85 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PPP4R3AQ6IN85 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PPP4R3AQ6IN85 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.32■■■□□ 2.44
PPP4R3AQ6IN85 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PPP4R3AQ6IN85 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.32■■■□□ 2.44
PPP4R3AQ6IN85 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.31■■■□□ 2.44
PPP4R3AQ6IN85 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.31■■■□□ 2.44
PPP4R3AQ6IN85 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.31■■■□□ 2.44
PPP4R3AQ6IN85 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PPP4R3AQ6IN85 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PPP4R3AQ6IN85 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
PPP4R3AQ6IN85 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PPP4R3AQ6IN85 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PPP4R3AQ6IN85 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPP4R3AQ6IN85 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPP4R3AQ6IN85 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PPP4R3AQ6IN85 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.27■■■□□ 2.44
PPP4R3AQ6IN85 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.26■■■□□ 2.43
PPP4R3AQ6IN85 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
PPP4R3AQ6IN85 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.25■■■□□ 2.43
PPP4R3AQ6IN85 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
PPP4R3AQ6IN85 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PPP4R3AQ6IN85 AP006261.1-201ENST00000584783 668 ntBASIC30.24■■■□□ 2.43
PPP4R3AQ6IN85 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PPP4R3AQ6IN85 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PPP4R3AQ6IN85 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PPP4R3AQ6IN85 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PPP4R3AQ6IN85 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.21■■■□□ 2.43
PPP4R3AQ6IN85 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PPP4R3AQ6IN85 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PPP4R3AQ6IN85 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.2■■■□□ 2.43
PPP4R3AQ6IN85 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.2■■■□□ 2.43
PPP4R3AQ6IN85 AC005559.1-201ENST00000589661 871 ntBASIC30.2■■■□□ 2.43
PPP4R3AQ6IN85 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PPP4R3AQ6IN85 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
PPP4R3AQ6IN85 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PPP4R3AQ6IN85 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.18■■■□□ 2.42
PPP4R3AQ6IN85 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.18■■■□□ 2.42
PPP4R3AQ6IN85 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PPP4R3AQ6IN85 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
PPP4R3AQ6IN85 MIR3665-201ENST00000578708 105 ntBASIC30.16■■■□□ 2.42
PPP4R3AQ6IN85 DUX4L28-201ENST00000623687 678 ntBASIC30.16■■■□□ 2.42
PPP4R3AQ6IN85 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PPP4R3AQ6IN85 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PPP4R3AQ6IN85 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PPP4R3AQ6IN85 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
PPP4R3AQ6IN85 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
PPP4R3AQ6IN85 AL162393.1-201ENST00000437852 946 ntBASIC30.13■■■□□ 2.41
PPP4R3AQ6IN85 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PPP4R3AQ6IN85 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.13■■■□□ 2.41
PPP4R3AQ6IN85 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.12■■■□□ 2.41
PPP4R3AQ6IN85 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
PPP4R3AQ6IN85 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PPP4R3AQ6IN85 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.11■■■□□ 2.41
PPP4R3AQ6IN85 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPP4R3AQ6IN85 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PPP4R3AQ6IN85 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.1■■■□□ 2.41
PPP4R3AQ6IN85 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
PPP4R3AQ6IN85 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PPP4R3AQ6IN85 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PPP4R3AQ6IN85 AL135925.1-201ENST00000605920 1701 ntBASIC30.08■■■□□ 2.41
PPP4R3AQ6IN85 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PPP4R3AQ6IN85 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PPP4R3AQ6IN85 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PPP4R3AQ6IN85 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.05■■■□□ 2.4
PPP4R3AQ6IN85 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.05■■■□□ 2.4
PPP4R3AQ6IN85 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.04■■■□□ 2.4
PPP4R3AQ6IN85 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PPP4R3AQ6IN85 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.03■■■□□ 2.4
PPP4R3AQ6IN85 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
PPP4R3AQ6IN85 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PPP4R3AQ6IN85 AC087741.3-201ENST00000624270 1347 ntBASIC30■■■□□ 2.39
PPP4R3AQ6IN85 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.99■■■□□ 2.39
PPP4R3AQ6IN85 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PPP4R3AQ6IN85 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.99■■■□□ 2.39
PPP4R3AQ6IN85 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
PPP4R3AQ6IN85 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PPP4R3AQ6IN85 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.98■■■□□ 2.39
PPP4R3AQ6IN85 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PPP4R3AQ6IN85 AC010864.1-201ENST00000609407 1511 ntBASIC29.97■■■□□ 2.39
PPP4R3AQ6IN85 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PPP4R3AQ6IN85 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PPP4R3AQ6IN85 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PPP4R3AQ6IN85 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PPP4R3AQ6IN85 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PPP4R3AQ6IN85 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.96■■■□□ 2.39
PPP4R3AQ6IN85 ST7-AS1-201ENST00000456775 1889 ntBASIC29.95■■■□□ 2.39
PPP4R3AQ6IN85 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
PPP4R3AQ6IN85 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
PPP4R3AQ6IN85 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
PPP4R3AQ6IN85 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PPP4R3AQ6IN85 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
PPP4R3AQ6IN85 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms