Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
KRT40Q6A162 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
KRT40Q6A162 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KRT40Q6A162 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
KRT40Q6A162 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.89■■■□□ 2.53
KRT40Q6A162 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
KRT40Q6A162 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
KRT40Q6A162 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
KRT40Q6A162 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
KRT40Q6A162 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
KRT40Q6A162 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.86■■■□□ 2.53
KRT40Q6A162 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
KRT40Q6A162 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.85■■■□□ 2.53
KRT40Q6A162 CAHM-201ENST00000604200 896 ntBASIC30.84■■■□□ 2.53
KRT40Q6A162 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
KRT40Q6A162 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
KRT40Q6A162 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
KRT40Q6A162 AL391121.1-201ENST00000607967 1349 ntBASIC30.82■■■□□ 2.52
KRT40Q6A162 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
KRT40Q6A162 AL162393.1-201ENST00000437852 946 ntBASIC30.82■■■□□ 2.52
KRT40Q6A162 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.82■■■□□ 2.52
KRT40Q6A162 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
KRT40Q6A162 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.81■■■□□ 2.52
KRT40Q6A162 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KRT40Q6A162 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KRT40Q6A162 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.79■■■□□ 2.52
KRT40Q6A162 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
KRT40Q6A162 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KRT40Q6A162 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
KRT40Q6A162 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.77■■■□□ 2.52
KRT40Q6A162 ST7-AS1-201ENST00000456775 1889 ntBASIC30.76■■■□□ 2.52
KRT40Q6A162 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
KRT40Q6A162 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
KRT40Q6A162 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KRT40Q6A162 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT40Q6A162 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT40Q6A162 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
KRT40Q6A162 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT40Q6A162 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT40Q6A162 AL135925.1-201ENST00000605920 1701 ntBASIC30.73■■■□□ 2.51
KRT40Q6A162 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.73■■■□□ 2.51
KRT40Q6A162 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
KRT40Q6A162 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
KRT40Q6A162 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
KRT40Q6A162 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
KRT40Q6A162 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
KRT40Q6A162 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.71■■■□□ 2.51
KRT40Q6A162 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
KRT40Q6A162 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT40Q6A162 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT40Q6A162 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
KRT40Q6A162 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
KRT40Q6A162 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
KRT40Q6A162 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KRT40Q6A162 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT40Q6A162 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT40Q6A162 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT40Q6A162 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
KRT40Q6A162 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
KRT40Q6A162 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT40Q6A162 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
KRT40Q6A162 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT40Q6A162 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT40Q6A162 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
KRT40Q6A162 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
KRT40Q6A162 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
KRT40Q6A162 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
KRT40Q6A162 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
KRT40Q6A162 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KRT40Q6A162 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
KRT40Q6A162 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT40Q6A162 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
KRT40Q6A162 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.61■■■□□ 2.49
KRT40Q6A162 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT40Q6A162 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KRT40Q6A162 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
KRT40Q6A162 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KRT40Q6A162 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
KRT40Q6A162 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.59■■■□□ 2.49
KRT40Q6A162 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
KRT40Q6A162 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KRT40Q6A162 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
KRT40Q6A162 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
KRT40Q6A162 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
KRT40Q6A162 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
KRT40Q6A162 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
KRT40Q6A162 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KRT40Q6A162 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KRT40Q6A162 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.56■■■□□ 2.48
KRT40Q6A162 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
KRT40Q6A162 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
KRT40Q6A162 ABCB10P3-201ENST00000561950 2166 ntBASIC30.55■■■□□ 2.48
KRT40Q6A162 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
KRT40Q6A162 AP006261.1-201ENST00000584783 668 ntBASIC30.55■■■□□ 2.48
KRT40Q6A162 MIR7108-201ENST00000614319 87 ntBASIC30.55■■■□□ 2.48
KRT40Q6A162 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KRT40Q6A162 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
KRT40Q6A162 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
KRT40Q6A162 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KRT40Q6A162 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms