Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 RDN37-1RDN37-1 5354 nt10.95□□□□□ -0.66
VPS4P52917 RDN37-2RDN37-2 5354 nt10.95□□□□□ -0.66
VPS4P52917 UTR1YJR049C 1593 nt10.93□□□□□ -0.66
VPS4P52917 SNF1YDR477W 1902 nt10.92□□□□□ -0.66
VPS4P52917 TIP1YBR067C 633 nt10.92□□□□□ -0.66
VPS4P52917 MAE1YKL029C 2010 nt10.92□□□□□ -0.66
VPS4P52917 RIM8YGL045W 1629 nt10.91□□□□□ -0.66
VPS4P52917 THI72YOR192C 1800 nt10.86□□□□□ -0.67
VPS4P52917 YER190C-AYER190C-A 576 nt10.86□□□□□ -0.67
VPS4P52917 YGR296C-AYGR296C-A 576 nt10.86□□□□□ -0.67
VPS4P52917 SOD2YHR008C 702 nt10.86□□□□□ -0.67
VPS4P52917 YIA6YIL006W 1122 nt10.86□□□□□ -0.67
VPS4P52917 YML133W-AYML133W-A 576 nt10.86□□□□□ -0.67
VPS4P52917 YNL339W-AYNL339W-A 576 nt10.86□□□□□ -0.67
VPS4P52917 YPL283W-AYPL283W-A 576 nt10.86□□□□□ -0.67
VPS4P52917 TAF13YML098W 504 nt10.85□□□□□ -0.67
VPS4P52917 TPO4YOR273C 1980 nt10.85□□□□□ -0.67
VPS4P52917 YKR005CYKR005C 1578 nt10.83□□□□□ -0.68
VPS4P52917 CSM1YCR086W 573 nt10.83□□□□□ -0.68
VPS4P52917 PAR32YDL173W 888 nt10.83□□□□□ -0.68
VPS4P52917 SED1YDR077W 1017 nt10.83□□□□□ -0.68
VPS4P52917 GAL3YDR009W 1563 nt10.82□□□□□ -0.68
VPS4P52917 HMG2YLR450W 3138 nt10.82□□□□□ -0.68
VPS4P52917 YGR259CYGR259C 441 nt10.82□□□□□ -0.68
VPS4P52917 YMR262WYMR262W 942 nt10.82□□□□□ -0.68
VPS4P52917 SNZ1YMR096W 894 nt10.78□□□□□ -0.68
VPS4P52917 TUB4YLR212C 1422 nt10.77□□□□□ -0.68
VPS4P52917 YJL118WYJL118W 660 nt10.76□□□□□ -0.69
VPS4P52917 BMT6YLR063W 1098 nt10.76□□□□□ -0.69
VPS4P52917 YPL251WYPL251W 303 nt10.76□□□□□ -0.69
VPS4P52917 POP2YNR052C 1302 nt10.76□□□□□ -0.69
VPS4P52917 YER152W-AYER152W-A 567 nt10.73□□□□□ -0.69
VPS4P52917 SAM3YPL274W 1764 nt10.72□□□□□ -0.69
VPS4P52917 GSF2YML048W 1212 nt10.72□□□□□ -0.69
VPS4P52917 YGL114WYGL114W 2178 nt10.71□□□□□ -0.69
VPS4P52917 QDR2YIL121W 1629 nt10.71□□□□□ -0.69
VPS4P52917 LIP1YMR298W 453 nt10.71□□□□□ -0.69
VPS4P52917 APS2YJR058C 444 nt10.7□□□□□ -0.7
VPS4P52917 MHF1YOL086W-A 273 nt10.7□□□□□ -0.7
VPS4P52917 LSB5YCL034W 1065 nt10.7□□□□□ -0.7
VPS4P52917 SPT20YOL148C 1815 nt10.7□□□□□ -0.7
VPS4P52917 URA8YJR103W 1737 nt10.69□□□□□ -0.7
VPS4P52917 POT1YIL160C 1254 nt10.68□□□□□ -0.7
VPS4P52917 YPR126CYPR126C 309 nt10.68□□□□□ -0.7
VPS4P52917 YCP4YCR004C 744 nt10.67□□□□□ -0.7
VPS4P52917 SAM35YHR083W 990 nt10.67□□□□□ -0.7
VPS4P52917 MEP3YPR138C 1470 nt10.67□□□□□ -0.7
VPS4P52917 RPT5YOR117W 1305 nt10.66□□□□□ -0.7
VPS4P52917 PRM5YIL117C 957 nt10.66□□□□□ -0.7
VPS4P52917 YMR103CYMR103C 363 nt10.66□□□□□ -0.7
VPS4P52917 RIB7YBR153W 735 nt10.65□□□□□ -0.7
VPS4P52917 DBP1YPL119C 1854 nt10.64□□□□□ -0.71
VPS4P52917 ESBP6YNL125C 2022 nt10.64□□□□□ -0.71
VPS4P52917 ACO2YJL200C 2370 nt10.64□□□□□ -0.71
VPS4P52917 LEU9YOR108W 1815 nt10.64□□□□□ -0.71
VPS4P52917 YBL086CYBL086C 1401 nt10.64□□□□□ -0.71
VPS4P52917 NIF3YGL221C 867 nt10.63□□□□□ -0.71
VPS4P52917 BRR1YPR057W 1026 nt10.63□□□□□ -0.71
VPS4P52917 SAM50YNL026W 1455 nt10.61□□□□□ -0.71
VPS4P52917 IRC24YIR036C 792 nt10.61□□□□□ -0.71
VPS4P52917 CTI6YPL181W 1521 nt10.61□□□□□ -0.71
VPS4P52917 KRE1YNL322C 942 nt10.6□□□□□ -0.71
VPS4P52917 BUD20YLR074C 501 nt10.59□□□□□ -0.71
VPS4P52917 PHO23YNL097C 993 nt10.59□□□□□ -0.71
VPS4P52917 NUC1YJL208C 990 nt10.58□□□□□ -0.72
VPS4P52917 BNI5YNL166C 1347 nt10.58□□□□□ -0.72
VPS4P52917 HIF1YLL022C 1158 nt10.57□□□□□ -0.72
VPS4P52917 DAK2YFL053W 1776 nt10.56□□□□□ -0.72
VPS4P52917 MSC1YML128C 1542 nt10.55□□□□□ -0.72
VPS4P52917 IGD1YFR017C 588 nt10.55□□□□□ -0.72
VPS4P52917 TOA2YKL058W 369 nt10.55□□□□□ -0.72
VPS4P52917 GTB1YDR221W 2109 nt10.55□□□□□ -0.72
VPS4P52917 MUP1YGR055W 1725 nt10.53□□□□□ -0.72
VPS4P52917 HXT1YHR094C 1713 nt10.53□□□□□ -0.72
VPS4P52917 IML3YBR107C 738 nt10.52□□□□□ -0.73
VPS4P52917 TPS1YBR126C 1488 nt10.52□□□□□ -0.73
VPS4P52917 ILV2YMR108W 2064 nt10.52□□□□□ -0.73
VPS4P52917 SWM1YDR260C 513 nt10.51□□□□□ -0.73
VPS4P52917 CDD1YLR245C 429 nt10.49□□□□□ -0.73
VPS4P52917 TRT2tT(CGU)K 72 nt10.48□□□□□ -0.73
VPS4P52917 RPC82YPR190C 1965 nt10.48□□□□□ -0.73
VPS4P52917 GND2YGR256W 1479 nt10.48□□□□□ -0.73
VPS4P52917 tA(AGC)DtA(AGC)D 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)FtA(AGC)F 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)GtA(AGC)G 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)HtA(AGC)H 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)JtA(AGC)J 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)K1tA(AGC)K1 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)K2tA(AGC)K2 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)LtA(AGC)L 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)M1tA(AGC)M1 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)M2tA(AGC)M2 73 nt10.46□□□□□ -0.73
VPS4P52917 tA(AGC)PtA(AGC)P 73 nt10.46□□□□□ -0.73
VPS4P52917 UFO1YML088W 2007 nt10.46□□□□□ -0.74
VPS4P52917 DTR1YBR180W 1719 nt10.45□□□□□ -0.74
VPS4P52917 OYE2YHR179W 1203 nt10.45□□□□□ -0.74
VPS4P52917 IPL1YPL209C 1104 nt10.45□□□□□ -0.74
VPS4P52917 YCR025CYCR025C 411 nt10.44□□□□□ -0.74
VPS4P52917 OXA1YER154W 1209 nt10.42□□□□□ -0.74
VPS4P52917 YNL024CYNL024C 741 nt10.42□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 58.9 ms