Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.58■■□□□ 1.21
TNFRSF1AP19438 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TNFRSF1AP19438 DUX4L28-201ENST00000623687 678 ntBASIC22.58■■□□□ 1.21
TNFRSF1AP19438 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.57■■□□□ 1.2
TNFRSF1AP19438 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TNFRSF1AP19438 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNFRSF1AP19438 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.56■■□□□ 1.2
TNFRSF1AP19438 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TNFRSF1AP19438 RPS2P35-201ENST00000443417 897 ntBASIC22.54■■□□□ 1.2
TNFRSF1AP19438 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNFRSF1AP19438 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFRSF1AP19438 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFRSF1AP19438 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNFRSF1AP19438 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFRSF1AP19438 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFRSF1AP19438 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFRSF1AP19438 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TNFRSF1AP19438 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFRSF1AP19438 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.51■■□□□ 1.19
TNFRSF1AP19438 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFRSF1AP19438 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFRSF1AP19438 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFRSF1AP19438 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFRSF1AP19438 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TNFRSF1AP19438 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TNFRSF1AP19438 AC044849.2-201ENST00000606596 710 ntBASIC22.49■■□□□ 1.19
TNFRSF1AP19438 AC087741.3-201ENST00000624270 1347 ntBASIC22.49■■□□□ 1.19
TNFRSF1AP19438 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.48■■□□□ 1.19
TNFRSF1AP19438 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFRSF1AP19438 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.47■■□□□ 1.19
TNFRSF1AP19438 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.46■■□□□ 1.19
TNFRSF1AP19438 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.46■■□□□ 1.19
TNFRSF1AP19438 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNFRSF1AP19438 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TNFRSF1AP19438 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNFRSF1AP19438 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TNFRSF1AP19438 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNFRSF1AP19438 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFRSF1AP19438 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TNFRSF1AP19438 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNFRSF1AP19438 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNFRSF1AP19438 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TNFRSF1AP19438 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TNFRSF1AP19438 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TNFRSF1AP19438 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TNFRSF1AP19438 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TNFRSF1AP19438 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.41■■□□□ 1.18
TNFRSF1AP19438 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.4■■□□□ 1.18
TNFRSF1AP19438 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.4■■□□□ 1.18
TNFRSF1AP19438 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.39■■□□□ 1.17
TNFRSF1AP19438 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFRSF1AP19438 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
TNFRSF1AP19438 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFRSF1AP19438 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
TNFRSF1AP19438 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF1AP19438 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TNFRSF1AP19438 AC108673.1-201ENST00000510422 1159 ntBASIC22.37■■□□□ 1.17
TNFRSF1AP19438 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TNFRSF1AP19438 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TNFRSF1AP19438 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFRSF1AP19438 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.36■■□□□ 1.17
TNFRSF1AP19438 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.36■■□□□ 1.17
TNFRSF1AP19438 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.35■■□□□ 1.17
TNFRSF1AP19438 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF1AP19438 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF1AP19438 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNFRSF1AP19438 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TNFRSF1AP19438 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.34■■□□□ 1.17
TNFRSF1AP19438 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF1AP19438 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
TNFRSF1AP19438 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF1AP19438 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.33■■□□□ 1.17
TNFRSF1AP19438 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFRSF1AP19438 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TNFRSF1AP19438 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TNFRSF1AP19438 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
TNFRSF1AP19438 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TNFRSF1AP19438 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.31■■□□□ 1.16
TNFRSF1AP19438 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
TNFRSF1AP19438 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFRSF1AP19438 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFRSF1AP19438 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFRSF1AP19438 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.29■■□□□ 1.16
TNFRSF1AP19438 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms