Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PF4V1P10720 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.99■□□□□ 0.95
PF4V1P10720 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PF4V1P10720 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PF4V1P10720 ABHD17AP4-201ENST00000411545 909 ntBASIC20.98■□□□□ 0.95
PF4V1P10720 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PF4V1P10720 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PF4V1P10720 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 MIR7108-201ENST00000614319 87 ntBASIC20.97■□□□□ 0.95
PF4V1P10720 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
PF4V1P10720 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PF4V1P10720 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PF4V1P10720 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PF4V1P10720 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PF4V1P10720 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PF4V1P10720 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PF4V1P10720 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PF4V1P10720 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PF4V1P10720 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PF4V1P10720 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PF4V1P10720 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PF4V1P10720 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PF4V1P10720 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.93■□□□□ 0.94
PF4V1P10720 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PF4V1P10720 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PF4V1P10720 AL161658.1-201ENST00000623641 1967 ntBASIC20.92■□□□□ 0.94
PF4V1P10720 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PF4V1P10720 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PF4V1P10720 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PF4V1P10720 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PF4V1P10720 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PF4V1P10720 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PF4V1P10720 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PF4V1P10720 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.89■□□□□ 0.94
PF4V1P10720 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PF4V1P10720 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PF4V1P10720 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.89■□□□□ 0.93
PF4V1P10720 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.89■□□□□ 0.93
PF4V1P10720 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.89■□□□□ 0.93
PF4V1P10720 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.89■□□□□ 0.93
PF4V1P10720 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PF4V1P10720 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PF4V1P10720 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.88■□□□□ 0.93
PF4V1P10720 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PF4V1P10720 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.87■□□□□ 0.93
PF4V1P10720 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PF4V1P10720 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.87■□□□□ 0.93
PF4V1P10720 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.87■□□□□ 0.93
PF4V1P10720 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.86■□□□□ 0.93
PF4V1P10720 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PF4V1P10720 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PF4V1P10720 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PF4V1P10720 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PF4V1P10720 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PF4V1P10720 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PF4V1P10720 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PF4V1P10720 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.84■□□□□ 0.93
PF4V1P10720 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.84■□□□□ 0.93
PF4V1P10720 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.83■□□□□ 0.93
PF4V1P10720 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PF4V1P10720 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PF4V1P10720 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.82■□□□□ 0.92
PF4V1P10720 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PF4V1P10720 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PF4V1P10720 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PF4V1P10720 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.81■□□□□ 0.92
PF4V1P10720 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PF4V1P10720 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PF4V1P10720 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PF4V1P10720 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PF4V1P10720 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PF4V1P10720 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PF4V1P10720 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
PF4V1P10720 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PF4V1P10720 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PF4V1P10720 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PF4V1P10720 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PF4V1P10720 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PF4V1P10720 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PF4V1P10720 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PF4V1P10720 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PF4V1P10720 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PF4V1P10720 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PF4V1P10720 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PF4V1P10720 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PF4V1P10720 HLA-V-202ENST00000446817 847 ntBASIC20.78■□□□□ 0.92
PF4V1P10720 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PF4V1P10720 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PF4V1P10720 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PF4V1P10720 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.77■□□□□ 0.92
PF4V1P10720 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PF4V1P10720 ZNRF2P2-203ENST00000454624 420 ntBASIC20.76■□□□□ 0.91
PF4V1P10720 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PF4V1P10720 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.76■□□□□ 0.91
PF4V1P10720 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.75■□□□□ 0.91
PF4V1P10720 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 959.6 ms