Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IGHV3-30-3P0DP02 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.67■□□□□ 0.58
IGHV3-30-3P0DP02 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IGHV3-30-3P0DP02 SETD8P1-201ENST00000623146 1180 ntBASIC18.67■□□□□ 0.58
IGHV3-30-3P0DP02 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IGHV3-30-3P0DP02 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGHV3-30-3P0DP02 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGHV3-30-3P0DP02 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
IGHV3-30-3P0DP02 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IGHV3-30-3P0DP02 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IGHV3-30-3P0DP02 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-30-3P0DP02 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IGHV3-30-3P0DP02 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.62■□□□□ 0.57
IGHV3-30-3P0DP02 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-30-3P0DP02 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-30-3P0DP02 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-30-3P0DP02 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-30-3P0DP02 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IGHV3-30-3P0DP02 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGHV3-30-3P0DP02 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.6■□□□□ 0.57
IGHV3-30-3P0DP02 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
IGHV3-30-3P0DP02 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-30-3P0DP02 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IGHV3-30-3P0DP02 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-30-3P0DP02 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGHV3-30-3P0DP02 AL133380.1-201ENST00000506013 324 ntBASIC18.58■□□□□ 0.56
IGHV3-30-3P0DP02 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
IGHV3-30-3P0DP02 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
IGHV3-30-3P0DP02 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-30-3P0DP02 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-30-3P0DP02 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-30-3P0DP02 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-30-3P0DP02 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGHV3-30-3P0DP02 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV3-30-3P0DP02 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV3-30-3P0DP02 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-30-3P0DP02 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
IGHV3-30-3P0DP02 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-30-3P0DP02 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV3-30-3P0DP02 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 AC097358.2-201ENST00000607541 1159 ntBASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV3-30-3P0DP02 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IGHV3-30-3P0DP02 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV3-30-3P0DP02 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.52■□□□□ 0.56
IGHV3-30-3P0DP02 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.52■□□□□ 0.56
IGHV3-30-3P0DP02 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV3-30-3P0DP02 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IGHV3-30-3P0DP02 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-30-3P0DP02 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV3-30-3P0DP02 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.5■□□□□ 0.55
IGHV3-30-3P0DP02 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.49■□□□□ 0.55
IGHV3-30-3P0DP02 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-30-3P0DP02 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV3-30-3P0DP02 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-30-3P0DP02 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV3-30-3P0DP02 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-30-3P0DP02 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IGHV3-30-3P0DP02 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV3-30-3P0DP02 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.47■□□□□ 0.55
IGHV3-30-3P0DP02 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.46■□□□□ 0.55
IGHV3-30-3P0DP02 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-30-3P0DP02 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-30-3P0DP02 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-30-3P0DP02 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV3-30-3P0DP02 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IGHV3-30-3P0DP02 AC136428.2-201ENST00000563187 214 ntBASIC18.45■□□□□ 0.54
IGHV3-30-3P0DP02 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
IGHV3-30-3P0DP02 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 WASH5P-204ENST00000632292 975 ntBASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV3-30-3P0DP02 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-30-3P0DP02 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.43■□□□□ 0.54
IGHV3-30-3P0DP02 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV3-30-3P0DP02 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-30-3P0DP02 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-30-3P0DP02 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV3-30-3P0DP02 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.42■□□□□ 0.54
IGHV3-30-3P0DP02 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.42■□□□□ 0.54
IGHV3-30-3P0DP02 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-30-3P0DP02 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV3-30-3P0DP02 ST7-AS1-201ENST00000456775 1889 ntBASIC18.41■□□□□ 0.54
IGHV3-30-3P0DP02 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV3-30-3P0DP02 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.4■□□□□ 0.54
IGHV3-30-3P0DP02 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.4■□□□□ 0.54
IGHV3-30-3P0DP02 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
IGHV3-30-3P0DP02 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
IGHV3-30-3P0DP02 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IGHV3-30-3P0DP02 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV3-30-3P0DP02 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.38■□□□□ 0.53
IGHV3-30-3P0DP02 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms