Protein–RNA interactions for Protein: P09234

SNRPC, U1 small nuclear ribonucleoprotein C, humanhuman

Known RBP Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP09234 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPCP09234 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPCP09234 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SNRPCP09234 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 DYNLL1-208ENST00000550178 581 ntBASIC20.76■□□□□ 0.91
SNRPCP09234 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPCP09234 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRPCP09234 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
SNRPCP09234 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRPCP09234 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRPCP09234 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNRPCP09234 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRPCP09234 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRPCP09234 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SNRPCP09234 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNRPCP09234 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNRPCP09234 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNRPCP09234 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.69■□□□□ 0.9
SNRPCP09234 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRPCP09234 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNRPCP09234 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRPCP09234 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNRPCP09234 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SNRPCP09234 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPCP09234 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SNRPCP09234 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPCP09234 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.64■□□□□ 0.9
SNRPCP09234 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPCP09234 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPCP09234 ST7-AS1-201ENST00000456775 1889 ntBASIC20.62■□□□□ 0.89
SNRPCP09234 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.62■□□□□ 0.89
SNRPCP09234 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SNRPCP09234 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNRPCP09234 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNRPCP09234 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPCP09234 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNRPCP09234 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SNRPCP09234 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPCP09234 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNRPCP09234 AL031258.1-201ENST00000623562 325 ntBASIC20.6■□□□□ 0.89
SNRPCP09234 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNRPCP09234 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.58■□□□□ 0.89
SNRPCP09234 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPCP09234 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPCP09234 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.57■□□□□ 0.88
SNRPCP09234 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPCP09234 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SNRPCP09234 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPCP09234 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPCP09234 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNRPCP09234 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPCP09234 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPCP09234 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPCP09234 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPCP09234 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.53■□□□□ 0.88
SNRPCP09234 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.53■□□□□ 0.88
SNRPCP09234 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPCP09234 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNRPCP09234 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPCP09234 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNRPCP09234 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPCP09234 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNRPCP09234 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SNRPCP09234 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNRPCP09234 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPCP09234 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPCP09234 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRPCP09234 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
SNRPCP09234 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPCP09234 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPCP09234 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SNRPCP09234 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SNRPCP09234 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPCP09234 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPCP09234 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNRPCP09234 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRPCP09234 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRPCP09234 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms