Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PRDM1O75626 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PRDM1O75626 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
PRDM1O75626 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PRDM1O75626 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.63■■■□□ 2.65
PRDM1O75626 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PRDM1O75626 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PRDM1O75626 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.62■■■□□ 2.65
PRDM1O75626 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PRDM1O75626 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
PRDM1O75626 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PRDM1O75626 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PRDM1O75626 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
PRDM1O75626 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.6■■■□□ 2.65
PRDM1O75626 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
PRDM1O75626 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.59■■■□□ 2.65
PRDM1O75626 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PRDM1O75626 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
PRDM1O75626 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.58■■■□□ 2.65
PRDM1O75626 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PRDM1O75626 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
PRDM1O75626 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.57■■■□□ 2.64
PRDM1O75626 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PRDM1O75626 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PRDM1O75626 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.56■■■□□ 2.64
PRDM1O75626 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PRDM1O75626 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PRDM1O75626 AC044849.2-201ENST00000606596 710 ntBASIC31.55■■■□□ 2.64
PRDM1O75626 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PRDM1O75626 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PRDM1O75626 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PRDM1O75626 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PRDM1O75626 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PRDM1O75626 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.51■■■□□ 2.63
PRDM1O75626 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PRDM1O75626 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PRDM1O75626 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.5■■■□□ 2.63
PRDM1O75626 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
PRDM1O75626 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PRDM1O75626 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PRDM1O75626 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.48■■■□□ 2.63
PRDM1O75626 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.48■■■□□ 2.63
PRDM1O75626 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.48■■■□□ 2.63
PRDM1O75626 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PRDM1O75626 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PRDM1O75626 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PRDM1O75626 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PRDM1O75626 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
PRDM1O75626 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.46■■■□□ 2.63
PRDM1O75626 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PRDM1O75626 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PRDM1O75626 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.44■■■□□ 2.62
PRDM1O75626 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PRDM1O75626 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PRDM1O75626 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
PRDM1O75626 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PRDM1O75626 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.42■■■□□ 2.62
PRDM1O75626 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PRDM1O75626 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRDM1O75626 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRDM1O75626 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.41■■■□□ 2.62
PRDM1O75626 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PRDM1O75626 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
PRDM1O75626 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.41■■■□□ 2.62
PRDM1O75626 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRDM1O75626 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.39■■■□□ 2.62
PRDM1O75626 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PRDM1O75626 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.39■■■□□ 2.62
PRDM1O75626 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRDM1O75626 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRDM1O75626 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.37■■■□□ 2.61
PRDM1O75626 MIR6090-201ENST00000622481 60 ntBASIC31.37■■■□□ 2.61
PRDM1O75626 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRDM1O75626 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRDM1O75626 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
PRDM1O75626 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRDM1O75626 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRDM1O75626 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRDM1O75626 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PRDM1O75626 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
PRDM1O75626 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRDM1O75626 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.3■■■□□ 2.6
PRDM1O75626 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRDM1O75626 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PRDM1O75626 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.3■■■□□ 2.6
PRDM1O75626 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
PRDM1O75626 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
PRDM1O75626 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PRDM1O75626 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRDM1O75626 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.28■■■□□ 2.6
PRDM1O75626 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRDM1O75626 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRDM1O75626 ABHD17AP4-201ENST00000411545 909 ntBASIC31.27■■■□□ 2.6
PRDM1O75626 AC108673.1-201ENST00000510422 1159 ntBASIC31.27■■■□□ 2.6
PRDM1O75626 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PRDM1O75626 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.26■■■□□ 2.6
PRDM1O75626 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PRDM1O75626 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PRDM1O75626 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.26■■■□□ 2.59
PRDM1O75626 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms