Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC135731.1-201ENST00000569415 2548 ntBASIC19.7■□□□□ 0.74
SNAI2O43623 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI2O43623 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI2O43623 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI2O43623 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI2O43623 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAI2O43623 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.69■□□□□ 0.74
SNAI2O43623 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNAI2O43623 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.68■□□□□ 0.74
SNAI2O43623 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAI2O43623 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAI2O43623 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI2O43623 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAI2O43623 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAI2O43623 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI2O43623 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI2O43623 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI2O43623 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAI2O43623 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SNAI2O43623 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAI2O43623 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAI2O43623 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAI2O43623 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SNAI2O43623 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI2O43623 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI2O43623 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAI2O43623 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAI2O43623 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNAI2O43623 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI2O43623 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI2O43623 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNAI2O43623 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI2O43623 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI2O43623 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAI2O43623 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAI2O43623 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI2O43623 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI2O43623 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI2O43623 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI2O43623 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNAI2O43623 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNAI2O43623 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAI2O43623 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNAI2O43623 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNAI2O43623 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.57■□□□□ 0.72
SNAI2O43623 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNAI2O43623 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNAI2O43623 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI2O43623 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNAI2O43623 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.55■□□□□ 0.72
SNAI2O43623 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI2O43623 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.54■□□□□ 0.72
SNAI2O43623 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNAI2O43623 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI2O43623 ZNRF2P1-201ENST00000441407 443 ntBASIC19.53■□□□□ 0.72
SNAI2O43623 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNAI2O43623 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI2O43623 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI2O43623 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNAI2O43623 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNAI2O43623 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNAI2O43623 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SNAI2O43623 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SNAI2O43623 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI2O43623 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI2O43623 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI2O43623 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAI2O43623 AL135925.1-201ENST00000605920 1701 ntBASIC19.51■□□□□ 0.71
SNAI2O43623 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI2O43623 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI2O43623 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI2O43623 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SNAI2O43623 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI2O43623 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.5■□□□□ 0.71
SNAI2O43623 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.49■□□□□ 0.71
SNAI2O43623 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI2O43623 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.49■□□□□ 0.71
SNAI2O43623 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI2O43623 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI2O43623 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SNAI2O43623 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI2O43623 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI2O43623 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI2O43623 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SNAI2O43623 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI2O43623 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI2O43623 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI2O43623 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI2O43623 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI2O43623 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI2O43623 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNAI2O43623 AC142086.6-201ENST00000621154 1765 ntBASIC19.44■□□□□ 0.7
SNAI2O43623 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SNAI2O43623 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI2O43623 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI2O43623 DYNLL1-208ENST00000550178 581 ntBASIC19.44■□□□□ 0.7
SNAI2O43623 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI2O43623 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNAI2O43623 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNAI2O43623 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms