Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
AP3D1O14617 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
AP3D1O14617 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
AP3D1O14617 AC139426.1-201ENST00000568218 2529 ntBASIC24.64■■□□□ 1.54
AP3D1O14617 SETD8P1-201ENST00000623146 1180 ntBASIC24.64■■□□□ 1.54
AP3D1O14617 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.63■■□□□ 1.53
AP3D1O14617 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
AP3D1O14617 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
AP3D1O14617 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.63■■□□□ 1.53
AP3D1O14617 ABCB10P3-201ENST00000561950 2166 ntBASIC24.63■■□□□ 1.53
AP3D1O14617 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
AP3D1O14617 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
AP3D1O14617 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
AP3D1O14617 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
AP3D1O14617 WASH5P-204ENST00000632292 975 ntBASIC24.62■■□□□ 1.53
AP3D1O14617 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
AP3D1O14617 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
AP3D1O14617 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
AP3D1O14617 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
AP3D1O14617 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
AP3D1O14617 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
AP3D1O14617 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
AP3D1O14617 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.59■■□□□ 1.53
AP3D1O14617 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
AP3D1O14617 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
AP3D1O14617 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
AP3D1O14617 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
AP3D1O14617 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
AP3D1O14617 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
AP3D1O14617 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
AP3D1O14617 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
AP3D1O14617 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
AP3D1O14617 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
AP3D1O14617 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.56■■□□□ 1.52
AP3D1O14617 ST7-AS1-201ENST00000456775 1889 ntBASIC24.56■■□□□ 1.52
AP3D1O14617 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
AP3D1O14617 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
AP3D1O14617 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.52■■□□□ 1.52
AP3D1O14617 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
AP3D1O14617 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
AP3D1O14617 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.52■■□□□ 1.52
AP3D1O14617 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
AP3D1O14617 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
AP3D1O14617 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
AP3D1O14617 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
AP3D1O14617 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
AP3D1O14617 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
AP3D1O14617 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
AP3D1O14617 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.49■■□□□ 1.51
AP3D1O14617 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
AP3D1O14617 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
AP3D1O14617 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
AP3D1O14617 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
AP3D1O14617 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
AP3D1O14617 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
AP3D1O14617 AL135925.1-201ENST00000605920 1701 ntBASIC24.47■■□□□ 1.51
AP3D1O14617 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
AP3D1O14617 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
AP3D1O14617 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
AP3D1O14617 AC136428.2-201ENST00000563187 214 ntBASIC24.45■■□□□ 1.5
AP3D1O14617 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
AP3D1O14617 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
AP3D1O14617 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
AP3D1O14617 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
AP3D1O14617 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
AP3D1O14617 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.43■■□□□ 1.5
AP3D1O14617 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
AP3D1O14617 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
AP3D1O14617 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
AP3D1O14617 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
AP3D1O14617 AC097358.2-201ENST00000607541 1159 ntBASIC24.42■■□□□ 1.5
AP3D1O14617 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.42■■□□□ 1.5
AP3D1O14617 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
AP3D1O14617 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
AP3D1O14617 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.41■■□□□ 1.5
AP3D1O14617 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.41■■□□□ 1.5
AP3D1O14617 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
AP3D1O14617 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
AP3D1O14617 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.4■■□□□ 1.5
AP3D1O14617 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
AP3D1O14617 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
AP3D1O14617 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
AP3D1O14617 CAHM-201ENST00000604200 896 ntBASIC24.37■■□□□ 1.49
AP3D1O14617 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
AP3D1O14617 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
AP3D1O14617 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
AP3D1O14617 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.36■■□□□ 1.49
AP3D1O14617 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
AP3D1O14617 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.36■■□□□ 1.49
AP3D1O14617 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
AP3D1O14617 AL391121.1-201ENST00000607967 1349 ntBASIC24.35■■□□□ 1.49
AP3D1O14617 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
AP3D1O14617 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.35■■□□□ 1.49
AP3D1O14617 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
AP3D1O14617 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
AP3D1O14617 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
AP3D1O14617 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
AP3D1O14617 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.33■■□□□ 1.49
AP3D1O14617 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
AP3D1O14617 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms