Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.68■■■□□ 2.34
PITPNM1O00562 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
PITPNM1O00562 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PITPNM1O00562 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.67■■■□□ 2.34
PITPNM1O00562 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.66■■■□□ 2.34
PITPNM1O00562 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PITPNM1O00562 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.66■■■□□ 2.34
PITPNM1O00562 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PITPNM1O00562 MIR3648-2-201ENST00000581792 180 ntBASIC29.66■■■□□ 2.34
PITPNM1O00562 MIR3648-1-201ENST00000615959 180 ntBASIC29.66■■■□□ 2.34
PITPNM1O00562 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.64■■■□□ 2.34
PITPNM1O00562 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
PITPNM1O00562 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PITPNM1O00562 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.63■■■□□ 2.33
PITPNM1O00562 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.62■■■□□ 2.33
PITPNM1O00562 AC016575.1-201ENST00000607026 382 ntBASIC29.61■■■□□ 2.33
PITPNM1O00562 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PITPNM1O00562 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.6■■■□□ 2.33
PITPNM1O00562 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.6■■■□□ 2.33
PITPNM1O00562 LINC01971-201ENST00000617888 1048 ntBASIC29.6■■■□□ 2.33
PITPNM1O00562 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
PITPNM1O00562 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.59■■■□□ 2.33
PITPNM1O00562 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PITPNM1O00562 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PITPNM1O00562 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PITPNM1O00562 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
PITPNM1O00562 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.58■■■□□ 2.33
PITPNM1O00562 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PITPNM1O00562 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PITPNM1O00562 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.57■■■□□ 2.32
PITPNM1O00562 DUX4L11-201ENST00000611504 1267 ntBASIC29.57■■■□□ 2.32
PITPNM1O00562 DUX4L12-201ENST00000614593 1267 ntBASIC29.57■■■□□ 2.32
PITPNM1O00562 DUX4L14-201ENST00000621227 1267 ntBASIC29.57■■■□□ 2.32
PITPNM1O00562 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.57■■■□□ 2.32
PITPNM1O00562 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PITPNM1O00562 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
PITPNM1O00562 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PITPNM1O00562 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PITPNM1O00562 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PITPNM1O00562 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PITPNM1O00562 CR559946.2-201ENST00000623684 991 ntBASIC29.53■■■□□ 2.32
PITPNM1O00562 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
PITPNM1O00562 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PITPNM1O00562 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.49■■■□□ 2.31
PITPNM1O00562 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PITPNM1O00562 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
PITPNM1O00562 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PITPNM1O00562 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PITPNM1O00562 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.47■■■□□ 2.31
PITPNM1O00562 HSD17B1P1-201ENST00000590052 955 ntBASIC29.46■■■□□ 2.31
PITPNM1O00562 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PITPNM1O00562 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PITPNM1O00562 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.44■■■□□ 2.3
PITPNM1O00562 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PITPNM1O00562 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.43■■■□□ 2.3
PITPNM1O00562 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.43■■■□□ 2.3
PITPNM1O00562 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.43■■■□□ 2.3
PITPNM1O00562 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PITPNM1O00562 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PITPNM1O00562 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
PITPNM1O00562 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.42■■■□□ 2.3
PITPNM1O00562 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
PITPNM1O00562 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.41■■■□□ 2.3
PITPNM1O00562 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PITPNM1O00562 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.39■■■□□ 2.3
PITPNM1O00562 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
PITPNM1O00562 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PITPNM1O00562 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PITPNM1O00562 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
PITPNM1O00562 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
PITPNM1O00562 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PITPNM1O00562 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
PITPNM1O00562 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PITPNM1O00562 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PITPNM1O00562 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.34■■■□□ 2.29
PITPNM1O00562 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PITPNM1O00562 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
PITPNM1O00562 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.32■■■□□ 2.28
PITPNM1O00562 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PITPNM1O00562 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
PITPNM1O00562 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.3■■■□□ 2.28
PITPNM1O00562 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PITPNM1O00562 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.27■■■□□ 2.28
PITPNM1O00562 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L13-201ENST00000554103 1267 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L15-201ENST00000611059 1267 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L23-201ENST00000615195 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L24-201ENST00000617576 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L22-201ENST00000618238 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L20-201ENST00000619712 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L21-201ENST00000622058 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L10-201ENST00000622460 1267 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 DUX4L25-201ENST00000624915 1269 ntBASIC29.27■■■□□ 2.28
PITPNM1O00562 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.26■■■□□ 2.27
PITPNM1O00562 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PITPNM1O00562 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.24■■■□□ 2.27
PITPNM1O00562 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PITPNM1O00562 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PITPNM1O00562 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.24■■■□□ 2.27
PITPNM1O00562 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms