Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CLRN2A0PK11 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CLRN2A0PK11 AC108673.1-201ENST00000510422 1159 ntBASIC32.24■■■□□ 2.75
CLRN2A0PK11 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.24■■■□□ 2.75
CLRN2A0PK11 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CLRN2A0PK11 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CLRN2A0PK11 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CLRN2A0PK11 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CLRN2A0PK11 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CLRN2A0PK11 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.21■■■□□ 2.75
CLRN2A0PK11 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.2■■■□□ 2.75
CLRN2A0PK11 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.19■■■□□ 2.74
CLRN2A0PK11 MIR4449-201ENST00000578365 66 ntBASIC32.19■■■□□ 2.74
CLRN2A0PK11 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
CLRN2A0PK11 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CLRN2A0PK11 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.18■■■□□ 2.74
CLRN2A0PK11 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.18■■■□□ 2.74
CLRN2A0PK11 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CLRN2A0PK11 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.18■■■□□ 2.74
CLRN2A0PK11 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CLRN2A0PK11 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.17■■■□□ 2.74
CLRN2A0PK11 MIR639-201ENST00000384974 98 ntBASIC32.17■■■□□ 2.74
CLRN2A0PK11 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.17■■■□□ 2.74
CLRN2A0PK11 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.17■■■□□ 2.74
CLRN2A0PK11 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
CLRN2A0PK11 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CLRN2A0PK11 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CLRN2A0PK11 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CLRN2A0PK11 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CLRN2A0PK11 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
CLRN2A0PK11 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.15■■■□□ 2.74
CLRN2A0PK11 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CLRN2A0PK11 AC016575.1-201ENST00000607026 382 ntBASIC32.13■■■□□ 2.73
CLRN2A0PK11 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLRN2A0PK11 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLRN2A0PK11 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CLRN2A0PK11 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.11■■■□□ 2.73
CLRN2A0PK11 MIR3648-2-201ENST00000581792 180 ntBASIC32.11■■■□□ 2.73
CLRN2A0PK11 MIR3648-1-201ENST00000615959 180 ntBASIC32.11■■■□□ 2.73
CLRN2A0PK11 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CLRN2A0PK11 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.1■■■□□ 2.73
CLRN2A0PK11 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.09■■■□□ 2.73
CLRN2A0PK11 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.09■■■□□ 2.73
CLRN2A0PK11 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CLRN2A0PK11 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
CLRN2A0PK11 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CLRN2A0PK11 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CLRN2A0PK11 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.04■■■□□ 2.72
CLRN2A0PK11 DUX4L11-201ENST00000611504 1267 ntBASIC32.04■■■□□ 2.72
CLRN2A0PK11 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CLRN2A0PK11 DUX4L12-201ENST00000614593 1267 ntBASIC32.04■■■□□ 2.72
CLRN2A0PK11 DUX4L14-201ENST00000621227 1267 ntBASIC32.04■■■□□ 2.72
CLRN2A0PK11 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CLRN2A0PK11 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CLRN2A0PK11 CR559946.2-201ENST00000623684 991 ntBASIC32.02■■■□□ 2.72
CLRN2A0PK11 LINC01971-201ENST00000617888 1048 ntBASIC32.01■■■□□ 2.71
CLRN2A0PK11 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.01■■■□□ 2.71
CLRN2A0PK11 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CLRN2A0PK11 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32■■■□□ 2.71
CLRN2A0PK11 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CLRN2A0PK11 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.99■■■□□ 2.71
CLRN2A0PK11 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CLRN2A0PK11 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLRN2A0PK11 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLRN2A0PK11 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLRN2A0PK11 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
CLRN2A0PK11 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CLRN2A0PK11 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.96■■■□□ 2.71
CLRN2A0PK11 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.96■■■□□ 2.71
CLRN2A0PK11 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
CLRN2A0PK11 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.95■■■□□ 2.71
CLRN2A0PK11 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.94■■■□□ 2.7
CLRN2A0PK11 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CLRN2A0PK11 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7
CLRN2A0PK11 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.93■■■□□ 2.7
CLRN2A0PK11 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.93■■■□□ 2.7
CLRN2A0PK11 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CLRN2A0PK11 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CLRN2A0PK11 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.91■■■□□ 2.7
CLRN2A0PK11 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.88■■■□□ 2.69
CLRN2A0PK11 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CLRN2A0PK11 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLRN2A0PK11 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CLRN2A0PK11 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CLRN2A0PK11 HSD17B1P1-201ENST00000590052 955 ntBASIC31.86■■■□□ 2.69
CLRN2A0PK11 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CLRN2A0PK11 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CLRN2A0PK11 AC120057.4-201ENST00000624722 1615 ntBASIC31.85■■■□□ 2.69
CLRN2A0PK11 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CLRN2A0PK11 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CLRN2A0PK11 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.83■■■□□ 2.69
CLRN2A0PK11 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLRN2A0PK11 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CLRN2A0PK11 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLRN2A0PK11 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CLRN2A0PK11 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLRN2A0PK11 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.8■■■□□ 2.68
CLRN2A0PK11 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLRN2A0PK11 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CLRN2A0PK11 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms