Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.81■■□□□ 1.08
A0A1W2PRF3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.8■■□□□ 1.08
A0A1W2PRF3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.8■■□□□ 1.08
A0A1W2PRF3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
A0A1W2PRF3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
A0A1W2PRF3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
A0A1W2PRF3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
A0A1W2PRF3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
A0A1W2PRF3 AC087741.3-201ENST00000624270 1347 ntBASIC21.79■■□□□ 1.08
A0A1W2PRF3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
A0A1W2PRF3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
A0A1W2PRF3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
A0A1W2PRF3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
A0A1W2PRF3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
A0A1W2PRF3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
A0A1W2PRF3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
A0A1W2PRF3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
A0A1W2PRF3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A0A1W2PRF3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
A0A1W2PRF3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
A0A1W2PRF3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.76■■□□□ 1.07
A0A1W2PRF3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A0A1W2PRF3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A0A1W2PRF3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
A0A1W2PRF3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
A0A1W2PRF3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
A0A1W2PRF3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A0A1W2PRF3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A0A1W2PRF3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A0A1W2PRF3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
A0A1W2PRF3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A0A1W2PRF3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
A0A1W2PRF3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
A0A1W2PRF3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.72■■□□□ 1.07
A0A1W2PRF3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
A0A1W2PRF3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
A0A1W2PRF3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
A0A1W2PRF3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
A0A1W2PRF3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.71■■□□□ 1.07
A0A1W2PRF3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
A0A1W2PRF3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
A0A1W2PRF3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
A0A1W2PRF3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
A0A1W2PRF3 AC044849.2-201ENST00000606596 710 ntBASIC21.7■■□□□ 1.06
A0A1W2PRF3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
A0A1W2PRF3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
A0A1W2PRF3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.69■■□□□ 1.06
A0A1W2PRF3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
A0A1W2PRF3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.68■■□□□ 1.06
A0A1W2PRF3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.68■■□□□ 1.06
A0A1W2PRF3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
A0A1W2PRF3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
A0A1W2PRF3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.67■■□□□ 1.06
A0A1W2PRF3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.66■■□□□ 1.06
A0A1W2PRF3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
A0A1W2PRF3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.66■■□□□ 1.06
A0A1W2PRF3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
A0A1W2PRF3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.65■■□□□ 1.06
A0A1W2PRF3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A0A1W2PRF3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A0A1W2PRF3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A0A1W2PRF3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
A0A1W2PRF3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
A0A1W2PRF3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
A0A1W2PRF3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.62■■□□□ 1.05
A0A1W2PRF3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
A0A1W2PRF3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
A0A1W2PRF3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
A0A1W2PRF3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
A0A1W2PRF3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
A0A1W2PRF3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.61■■□□□ 1.05
A0A1W2PRF3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
A0A1W2PRF3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
A0A1W2PRF3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.6■■□□□ 1.05
A0A1W2PRF3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
A0A1W2PRF3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
A0A1W2PRF3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.59■■□□□ 1.05
A0A1W2PRF3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.59■■□□□ 1.05
A0A1W2PRF3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
A0A1W2PRF3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.58■■□□□ 1.05
A0A1W2PRF3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
A0A1W2PRF3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
A0A1W2PRF3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
A0A1W2PRF3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
A0A1W2PRF3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
A0A1W2PRF3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.56■■□□□ 1.04
A0A1W2PRF3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
A0A1W2PRF3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
A0A1W2PRF3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
A0A1W2PRF3 MIR6090-201ENST00000622481 60 ntBASIC21.55■■□□□ 1.04
A0A1W2PRF3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
A0A1W2PRF3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
A0A1W2PRF3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
A0A1W2PRF3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1W2PRF3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.54■■□□□ 1.04
A0A1W2PRF3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
A0A1W2PRF3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
A0A1W2PRF3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
A0A1W2PRF3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
A0A1W2PRF3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms