Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ST7-AS1-201ENST00000456775 1889 ntBASIC18.79■□□□□ 0.6
TRBV6-4A0A1B0GX49 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-4A0A1B0GX49 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-4A0A1B0GX49 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV6-4A0A1B0GX49 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TRBV6-4A0A1B0GX49 AL135925.1-201ENST00000605920 1701 ntBASIC18.77■□□□□ 0.59
TRBV6-4A0A1B0GX49 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-4A0A1B0GX49 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV6-4A0A1B0GX49 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.76■□□□□ 0.59
TRBV6-4A0A1B0GX49 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV6-4A0A1B0GX49 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-4A0A1B0GX49 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV6-4A0A1B0GX49 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV6-4A0A1B0GX49 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRBV6-4A0A1B0GX49 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV6-4A0A1B0GX49 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-4A0A1B0GX49 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV6-4A0A1B0GX49 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRBV6-4A0A1B0GX49 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRBV6-4A0A1B0GX49 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-4A0A1B0GX49 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV6-4A0A1B0GX49 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV6-4A0A1B0GX49 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV6-4A0A1B0GX49 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRBV6-4A0A1B0GX49 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV6-4A0A1B0GX49 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 ABCB10P3-201ENST00000561950 2166 ntBASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV6-4A0A1B0GX49 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-4A0A1B0GX49 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-4A0A1B0GX49 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-4A0A1B0GX49 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-4A0A1B0GX49 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV6-4A0A1B0GX49 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV6-4A0A1B0GX49 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRBV6-4A0A1B0GX49 AL391121.1-201ENST00000607967 1349 ntBASIC18.65■□□□□ 0.58
TRBV6-4A0A1B0GX49 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV6-4A0A1B0GX49 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRBV6-4A0A1B0GX49 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 AC097358.2-201ENST00000607541 1159 ntBASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV6-4A0A1B0GX49 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-4A0A1B0GX49 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV6-4A0A1B0GX49 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 AC136428.2-201ENST00000563187 214 ntBASIC18.62■□□□□ 0.57
TRBV6-4A0A1B0GX49 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV6-4A0A1B0GX49 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-4A0A1B0GX49 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-4A0A1B0GX49 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-4A0A1B0GX49 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV6-4A0A1B0GX49 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV6-4A0A1B0GX49 CAHM-201ENST00000604200 896 ntBASIC18.59■□□□□ 0.57
TRBV6-4A0A1B0GX49 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
TRBV6-4A0A1B0GX49 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV6-4A0A1B0GX49 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV6-4A0A1B0GX49 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 AC010864.1-201ENST00000609407 1511 ntBASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRBV6-4A0A1B0GX49 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV6-4A0A1B0GX49 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms