Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV23DV6A0A075B6W5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 AC135731.1-201ENST00000569415 2548 ntBASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 ST7-AS1-201ENST00000456775 1889 ntBASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV23DV6A0A075B6W5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV23DV6A0A075B6W5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV23DV6A0A075B6W5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV23DV6A0A075B6W5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAV23DV6A0A075B6W5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV23DV6A0A075B6W5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV23DV6A0A075B6W5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV23DV6A0A075B6W5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV23DV6A0A075B6W5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV23DV6A0A075B6W5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV23DV6A0A075B6W5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV23DV6A0A075B6W5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV23DV6A0A075B6W5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV23DV6A0A075B6W5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV23DV6A0A075B6W5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV23DV6A0A075B6W5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV23DV6A0A075B6W5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV23DV6A0A075B6W5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV23DV6A0A075B6W5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV23DV6A0A075B6W5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV23DV6A0A075B6W5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV23DV6A0A075B6W5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV23DV6A0A075B6W5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV23DV6A0A075B6W5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV23DV6A0A075B6W5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TRAV23DV6A0A075B6W5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV23DV6A0A075B6W5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV23DV6A0A075B6W5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV23DV6A0A075B6W5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV23DV6A0A075B6W5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV23DV6A0A075B6W5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV23DV6A0A075B6W5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV23DV6A0A075B6W5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV23DV6A0A075B6W5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV23DV6A0A075B6W5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV23DV6A0A075B6W5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV23DV6A0A075B6W5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV23DV6A0A075B6W5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV23DV6A0A075B6W5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV23DV6A0A075B6W5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV23DV6A0A075B6W5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV23DV6A0A075B6W5 AC142086.6-201ENST00000621154 1765 ntBASIC16.97■□□□□ 0.31
TRAV23DV6A0A075B6W5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV23DV6A0A075B6W5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV23DV6A0A075B6W5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV23DV6A0A075B6W5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV23DV6A0A075B6W5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV23DV6A0A075B6W5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV23DV6A0A075B6W5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV23DV6A0A075B6W5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV23DV6A0A075B6W5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV23DV6A0A075B6W5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV23DV6A0A075B6W5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV23DV6A0A075B6W5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV23DV6A0A075B6W5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV23DV6A0A075B6W5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV23DV6A0A075B6W5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRAV23DV6A0A075B6W5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV23DV6A0A075B6W5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV23DV6A0A075B6W5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 AL135925.1-201ENST00000605920 1701 ntBASIC16.9■□□□□ 0.3
TRAV23DV6A0A075B6W5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC16.89■□□□□ 0.3
TRAV23DV6A0A075B6W5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRAV23DV6A0A075B6W5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 AC006077.2-201ENST00000623591 457 ntBASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV23DV6A0A075B6W5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms