Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EXOSC1Q9Y3B2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 AP004607.7-201ENST00000527152 1677 ntBASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXOSC1Q9Y3B2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 PLK5-205ENST00000642079 1969 ntBASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EXOSC1Q9Y3B2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
EXOSC1Q9Y3B2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EXOSC1Q9Y3B2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EXOSC1Q9Y3B2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
EXOSC1Q9Y3B2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC1Q9Y3B2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 TSPY9P-201ENST00000440215 945 ntBASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 TSPY11P-201ENST00000442607 1045 ntBASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EXOSC1Q9Y3B2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
EXOSC1Q9Y3B2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms