Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCL1Q9Y2P8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.15■□□□□ 0.34
RCL1Q9Y2P8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RCL1Q9Y2P8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.14■□□□□ 0.34
RCL1Q9Y2P8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.14■□□□□ 0.34
RCL1Q9Y2P8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 HSD17B1P1-201ENST00000590052 955 ntBASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCL1Q9Y2P8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 AC103834.1-201ENST00000520383 144 ntBASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 AC103724.3-201ENST00000564481 992 ntBASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.13■□□□□ 0.33
RCL1Q9Y2P8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 ABHD17AP5-201ENST00000580133 923 ntBASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 AC021242.3-201ENST00000607598 1377 ntBASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms