Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
MLH3Q9UHC1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.63■■■□□ 2.65
MLH3Q9UHC1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 AL589743.5-201ENST00000616611 1050 ntBASIC31.62■■■□□ 2.65
MLH3Q9UHC1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MLH3Q9UHC1 AC092368.3-202ENST00000574180 1591 ntBASIC31.62■■■□□ 2.65
MLH3Q9UHC1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 KRT17P3-201ENST00000420566 1262 ntBASIC31.61■■■□□ 2.65
MLH3Q9UHC1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC31.61■■■□□ 2.65
MLH3Q9UHC1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 AC211429.1-201ENST00000415277 523 ntBASIC31.6■■■□□ 2.65
MLH3Q9UHC1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 AC012618.2-201ENST00000428058 849 ntBASIC31.6■■■□□ 2.65
MLH3Q9UHC1 LINC01023-201ENST00000606054 436 ntBASIC31.6■■■□□ 2.65
MLH3Q9UHC1 AC010331.1-201ENST00000611423 582 ntBASIC31.6■■■□□ 2.65
MLH3Q9UHC1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
MLH3Q9UHC1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 MCRIP2P1-201ENST00000394346 511 ntBASIC31.59■■■□□ 2.65
MLH3Q9UHC1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
MLH3Q9UHC1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 AC087742.1-201ENST00000575880 1738 ntBASIC31.58■■■□□ 2.65
MLH3Q9UHC1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
MLH3Q9UHC1 SOX15-203ENST00000570788 1093 ntBASIC31.58■■■□□ 2.65
MLH3Q9UHC1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
MLH3Q9UHC1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MLH3Q9UHC1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
MLH3Q9UHC1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 BX088651.1-201ENST00000540551 451 ntBASIC31.55■■■□□ 2.64
MLH3Q9UHC1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.55■■■□□ 2.64
MLH3Q9UHC1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms