Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALYQ9NYX4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CALYQ9NYX4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CALYQ9NYX4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CALYQ9NYX4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.38■□□□□ 0.37
CALYQ9NYX4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CALYQ9NYX4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
CALYQ9NYX4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 LINC02228-203ENST00000641970 1355 ntBASIC17.37■□□□□ 0.37
CALYQ9NYX4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CALYQ9NYX4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.37■□□□□ 0.37
CALYQ9NYX4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CALYQ9NYX4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CALYQ9NYX4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CALYQ9NYX4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 AC053503.5-201ENST00000601508 636 ntBASIC17.36■□□□□ 0.37
CALYQ9NYX4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CALYQ9NYX4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 KRT87P-202ENST00000534226 1464 ntBASIC17.36■□□□□ 0.37
CALYQ9NYX4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CALYQ9NYX4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.36■□□□□ 0.37
CALYQ9NYX4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
CALYQ9NYX4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CALYQ9NYX4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 ZNRF2P3-201ENST00000424200 374 ntBASIC17.35■□□□□ 0.37
CALYQ9NYX4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CALYQ9NYX4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 AC123595.1-201ENST00000440769 1046 ntBASIC17.34■□□□□ 0.37
CALYQ9NYX4 YBX1P1-201ENST00000445822 960 ntBASIC17.34■□□□□ 0.37
CALYQ9NYX4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 AL049796.1-201ENST00000565336 1766 ntBASIC17.34■□□□□ 0.37
CALYQ9NYX4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CALYQ9NYX4 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CALYQ9NYX4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.33■□□□□ 0.37
CALYQ9NYX4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms